RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 CMA1P23946 247 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 HOXA9P31269 272 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 OR1D2P34982 312 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 ASIC1P78348 528 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 BECN1Q14457 450 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 VARS2Q5ST30 1063 aaKnown RBP16.52■□□□□ 0.24
COL27A1-206ENST00000490831 CCDC149Q6ZUS6 474 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 EPM2AIP1Q7L775 607 aaPredicted RBP16.52■□□□□ 0.24
COL27A1-206ENST00000490831 BEST2Q8NFU1 509 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 EDAQ92838 391 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 LRFN3Q9BTN0 628 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 PRKD2Q9BZL6 878 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 WDR6Q9NNW5 1121 aaKnown RBP16.52■□□□□ 0.24
COL27A1-206ENST00000490831 KCNH3Q9ULD8 1083 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 ATP6V1DQ9Y5K8 247 aa16.52■□□□□ 0.24
COL27A1-206ENST00000490831 FAM237AA0A1B0GTK4 181 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 ANO9A1A5B4 782 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 PRR33A8MZF0 331 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
COL27A1-206ENST00000490831 PRPF6O94906 941 aaKnown RBP16.51■□□□□ 0.23
COL27A1-206ENST00000490831 LDHAP00338 332 aaKnown RBP16.51■□□□□ 0.23
COL27A1-206ENST00000490831 NFICP08651 508 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 HNRNPA1P09651 372 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL27A1-206ENST00000490831 SLFN14P0C7P3 912 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 MCM4P33991 863 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 TMEM132DQ14C87 1099 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 UVSSAQ2YD98 709 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 STXBP4Q6ZWJ1 553 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 UNC13DQ70J99 1090 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 PLCD3Q8N3E9 789 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 TMEM130Q8N3G9 435 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 APPL2Q8NEU8 664 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 SMG7Q92540 1137 aaKnown RBP16.51■□□□□ 0.23
COL27A1-206ENST00000490831 SPATA32Q96LK8 384 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 HPSEQ9Y251 543 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 CDY1Q9Y6F8 540 aa16.51■□□□□ 0.23
COL27A1-206ENST00000490831 PVALEFA0A1B0GWK0 134 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 H7C4K7 107 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 PIRO00625 290 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
COL27A1-206ENST00000490831 ABLIM3O94929 683 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 IL18RAPO95256 599 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 HOXD13P35453 343 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 GUCY2FP51841 1108 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 FAM26FQ5R3K3 315 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 OTOP3Q7RTS5 596 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 BRSK2Q8IWQ3 736 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 TDRD5Q8NAT2 981 aaKnown RBP16.5■□□□□ 0.23
COL27A1-206ENST00000490831 GLIS3Q8NEA6 775 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 ZNF507Q8TCN5 953 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 CHAMP1Q96JM3 812 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 SCAND2PQ9GZW5 306 aaPredicted RBP16.5■□□□□ 0.23
COL27A1-206ENST00000490831 TSHZ2Q9NRE2 1034 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 TECTAO75443 2155 aa16.5■□□□□ 0.23
COL27A1-206ENST00000490831 CLUHO75153 1309 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 UBE4BO95155 1302 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 PPEF2O14830 753 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 EXTL3O43909 919 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 OAZ2O95190 189 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 C8AP07357 584 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 PFKFB1P16118 471 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 SP100P23497 879 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-206ENST00000490831 LILRA4P59901 499 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 ZXDAP98168 799 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 ROR1Q01973 937 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 LIN9Q5TKA1 542 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 C9orf57Q5W0N0 161 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 EFCAB13Q8IY85 973 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 ZSWIM2Q8NEG5 633 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 ZNF461Q8TAF7 563 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 CBWD1Q9BRT8 395 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 FAM213AQ9BRX8 229 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 OXCT2Q9BYC2 517 aaPredicted RBP16.49■□□□□ 0.23
COL27A1-206ENST00000490831 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 TCHHQ07283 1943 aa16.49■□□□□ 0.23
COL27A1-206ENST00000490831 FAM86C2PA6NEL3 165 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 N4BP1O75113 896 aaKnown RBP16.48■□□□□ 0.23
COL27A1-206ENST00000490831 TYMPP19971 482 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 CASP1P29466 404 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 WNT7BP56706 349 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 CUL4BQ13620 913 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 PPM1LQ5SGD2 360 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 TPGS2Q68CL5 300 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 ZNF280DQ6N043 979 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 CEP57L1Q8IYX8 460 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 ACSF2Q96CM8 615 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-206ENST00000490831 SAAL1Q96ER3 474 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 BLZF1Q9H2G9 400 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 MAFFQ9ULX9 164 aa16.48■□□□□ 0.23
COL27A1-206ENST00000490831 MYO10Q9HD67 2058 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 A0A1B0GVL5 298 aa16.47■□□□□ 0.23
COL27A1-206ENST00000490831 A0A1W2PQ27 194 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms