RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 SUSD3Q96L08 255 aa12.88□□□□□ -0.35
FDPS-215ENST00000490140 GOLGA2P5Q9HBQ8 144 aa12.88□□□□□ -0.35
FDPS-215ENST00000490140 TRPV5Q9NQA5 729 aa12.88□□□□□ -0.35
FDPS-215ENST00000490140 PRMT8Q9NR22 394 aaPredicted RBP12.88□□□□□ -0.35
FDPS-215ENST00000490140 SH2B1Q9NRF2 756 aaPredicted RBP12.88□□□□□ -0.35
FDPS-215ENST00000490140 HEBP1Q9NRV9 189 aa12.88□□□□□ -0.35
FDPS-215ENST00000490140 ARHGAP28Q9P2N2 729 aa12.88□□□□□ -0.35
FDPS-215ENST00000490140 CDV3Q9UKY7 258 aaKnown RBP12.88□□□□□ -0.35
FDPS-215ENST00000490140 I3L4J1 428 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 HIP1RO75146 1068 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 TOM1L1O75674 476 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 EDN1P05305 212 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 PSMC3P17980 439 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 SCP2P22307 547 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 CCR3P51677 355 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
FDPS-215ENST00000490140 ALKAL1Q6UXT8 129 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 USP37Q86T82 979 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
FDPS-215ENST00000490140 ASB16Q96NS5 453 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 SLITRK6Q9H5Y7 841 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 KCND2Q9NZV8 630 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 ANKFY1Q9P2R3 1169 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 AFF4Q9UHB7 1163 aaKnown RBP12.87□□□□□ -0.35
FDPS-215ENST00000490140 FBXL5Q9UKA1 691 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 USP20Q9Y2K6 914 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 NOTCH4Q99466 2003 aa12.87□□□□□ -0.35
FDPS-215ENST00000490140 FGF19O95750 216 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 CD72P21854 359 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 PRPHP41219 470 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
FDPS-215ENST00000490140 YWHAHQ04917 246 aaPredicted RBP12.86□□□□□ -0.35
FDPS-215ENST00000490140 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
FDPS-215ENST00000490140 LRRC32Q14392 662 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 RSPO4Q2I0M5 234 aaPredicted RBP12.86□□□□□ -0.35
FDPS-215ENST00000490140 PRSS36Q5K4E3 855 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 MAMSTRQ6ZN01 415 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 CCDC83Q8IWF9 413 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 YAF2Q8IY57 180 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 CEP120Q8N960 986 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 NELL1Q92832 810 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 TARS2Q9BW92 718 aaKnown RBP12.86□□□□□ -0.35
FDPS-215ENST00000490140 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 CHRDQ9H2X0 955 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 PCDHB8Q9UN66 801 aa12.86□□□□□ -0.35
FDPS-215ENST00000490140 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
FDPS-215ENST00000490140 TPRP12270 2363 aaKnown RBP12.86□□□□□ -0.35
FDPS-215ENST00000490140 ZNF263O14978 683 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 CLDN3O15551 220 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 FOXD2O60548 495 aaPredicted RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 LILRB5O75023 590 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 HARSP12081 509 aaKnown RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 PROZP22891 400 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 PAX3P23760 479 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 GUCY2CP25092 1073 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 ABCD1P33897 745 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 MLLT6P55198 1093 aaPredicted RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 MTAPQ13126 283 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 PTGDRQ13258 359 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 MRPL58Q14197 206 aaKnown RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 GRM2Q14416 872 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 FAM78AQ5JUQ0 283 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 DCLK2Q8N568 766 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 FAM200AQ8TCP9 573 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 CSGALNACT1Q8TDX6 532 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 CDK5RAP3Q96JB5 506 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 TSPAN18Q96SJ8 248 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 PLEKHA5Q9HAU0 1116 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 TRPV4Q9HBA0 871 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 LARSQ9P2J5 1176 aaKnown RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 USP18Q9UMW8 372 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 NDRG2Q9UN36 371 aaKnown RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 PIAS3Q9Y6X2 628 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 MYH11P35749 1972 aa12.85□□□□□ -0.35
FDPS-215ENST00000490140 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
FDPS-215ENST00000490140 EPG5Q9HCE0 2579 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 CACNA1BQ00975 2339 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 MED19A0JLT2 244 aaPredicted RBP12.84□□□□□ -0.35
FDPS-215ENST00000490140 OR6C75A6NL08 312 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 LRP3O75074 770 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 CLTAP09496 248 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 MYL4P12829 197 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 PLS3P13797 630 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 FCARP24071 287 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 U2AF2P26368 475 aaKnown RBP eCLIP12.84□□□□□ -0.35
FDPS-215ENST00000490140 GDI1P31150 447 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 EPHB3P54753 998 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 EPHA5P54756 1037 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 PPP2R3AQ06190 1150 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 TWF1Q12792 350 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 LAIR1Q6GTX8 287 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 RINT1Q6NUQ1 792 aa12.84□□□□□ -0.35
FDPS-215ENST00000490140 CD300LGQ6UXG3 332 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms