RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 LRRK1Q38SD2 2015 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 SDK2Q58EX2 2172 aa8.52□□□□□ -1.05
EXOSC3-206ENST00000489414 RP1L1Q8IWN7 2480 aaPredicted RBP8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 GOLIM4O00461 696 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF197O14709 1029 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 AP5Z1O43299 807 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 MOSPD3O75425 235 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 NCAPHQ15003 741 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 SKIDA1Q1XH10 827 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 MAP7D1Q3KQU3 841 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 ARHGAP29Q52LW3 1261 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 RTP2Q5QGT7 225 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 FUT10Q6P4F1 479 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 KCTD12Q96CX2 325 aaKnown RBP8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 LRRC3BQ96PB8 259 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 FBRSL1Q9HCM7 1045 aaKnown RBP8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 KANSL3Q9P2N6 904 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
EXOSC3-206ENST00000489414 ARHGEF17Q96PE2 2063 aaPredicted RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 JMJD1CQ15652 2540 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 ADAM12O43184 909 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF623O75123 536 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 PPFIA2O75334 1257 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 FAM87AP0C7U9 286 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 DRD1P21728 446 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 HOXA13P31271 388 aaPredicted RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 CASRP41180 1078 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 OR1G1P47890 313 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 PTH1RQ03431 593 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF33AQ06730 810 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 SCRN1Q12765 414 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 ITPRIPL2Q3MIP1 535 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 HAUS6Q7Z4H7 955 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 EZH1Q92800 747 aaPredicted RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 FAM20AQ96MK3 541 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 CORO1BQ9BR76 489 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 PUS7LQ9H0K6 701 aaKnown RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 EPB41L4AQ9HCS5 686 aaPredicted RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 RTEL1Q9NZ71 1219 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 PLAAQ9Y263 795 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 FNDC3AQ9Y2H6 1198 aaKnown RBP8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 PCDHGA1Q9Y5H4 931 aa8.5□□□□□ -1.05
EXOSC3-206ENST00000489414 CILPO75339 1184 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 POMCP01189 267 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 SNHG28P0DPA3 235 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 MS4A1P11836 297 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 KCNA2P16389 499 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 FGFR4P22455 802 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 INHBCP55103 352 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 DSC1Q08554 894 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 UBE3CQ15386 1083 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 HES3Q5TGS1 186 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 PDZD4Q76G19 769 aaPredicted RBP8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 ARHGAP9Q9BRR9 750 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 SLC25A18Q9H1K4 315 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 CPVLQ9H3G5 476 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 FAM105AQ9NUU6 356 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 GMIPQ9P107 970 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 CSPG4Q6UVK1 2322 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 RTTNQ86VV8 2226 aa8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 NUP210Q8TEM1 1887 aaPredicted RBP8.49□□□□□ -1.05
EXOSC3-206ENST00000489414 ZBTB42B2RXF5 422 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 PRF1P14222 555 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 CD97P48960 835 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 EPHA5P54756 1037 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 NLRP11P59045 1033 aaKnown RBP8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 PLCB2Q00722 1185 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 RPL6Q02878 288 aaKnown RBP8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 AAMPQ13685 434 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 RAB33AQ14088 237 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 PTPAQ15257 358 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 ARL13BQ3SXY8 428 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 PLPPR4Q7Z2D5 763 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 SLC41A1Q8IVJ1 513 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 DEFB119Q8N690 84 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 LNX1Q8TBB1 728 aaPredicted RBP8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 ZNF564Q8TBZ8 553 aaPredicted RBP8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 EXTL1Q92935 676 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 STRBPQ96SI9 672 aaKnown RBP8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 KDM4CQ9H3R0 1056 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 AZI2Q9H6S1 392 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 GAREM1Q9H706 876 aa8.48□□□□□ -1.05
EXOSC3-206ENST00000489414 TDRD15B5MCY1 1934 aaKnown RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 ARHGEF37A1IGU5 675 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 TSPY2A6NKD2 308 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 TRIM66O15016 1216 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 PPP1R37O75864 691 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 RECQL4O94761 1208 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 C22orf31O95567 290 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 CER1O95813 267 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 CLDN1O95832 211 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 TOP1P11387 765 aaKnown RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 CDK4P11802 303 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 DARSP14868 501 aaKnown RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 RAB27AP51159 221 aa8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 OS9Q13438 667 aaPredicted RBP8.47□□□□□ -1.05
EXOSC3-206ENST00000489414 BYSLQ13895 437 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms