RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 ZNF446Q9NWS9 450 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 COMMD8Q9NX08 183 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 TRHDEQ9UKU6 1024 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 IKBKGQ9Y6K9 419 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 PLEKHG2Q9H7P9 1386 aa6.13□□□□□ -1.43
COPS3-209ENST00000486810 FAM25EA8MYX2 175 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA12O60330 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PRAMEF4O60810 478 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 NPEPPSP55786 919 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 WNT3AP56704 352 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PRKD1Q15139 912 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 SYDE2Q5VT97 1194 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 EFCAB2Q5VUJ9 269 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 BTNL9Q6UXG8 535 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 Q6ZVL8 140 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 SRLQ86TD4 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 CCAR1Q8IX12 1150 aaKnown RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 C1orf162Q8NEQ5 155 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 FAM76AQ8TAV0 307 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 MIPOL1Q8TD10 442 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 SH3RF3Q8TEJ3 882 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 RIN2Q8WYP3 895 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 GOLGA1Q92805 767 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 HOXB13Q92826 284 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 FAM89AQ96GI7 184 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 RSRC1Q96IZ7 334 aaKnown RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 MPP4Q96JB8 637 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 SLC2A13Q96QE2 648 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PANK3Q9H999 370 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 DMRT3Q9NQL9 472 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 ZNF277Q9NRM2 450 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 EXOC1Q9NV70 894 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 RABL2AQ9UBK7 228 aaPredicted RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 KIAA1107Q9UPP5 1409 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA9Q9Y5G4 932 aaKnown RBP6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA8Q9Y5G5 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA7Q9Y5G6 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA6Q9Y5G7 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA3Q9Y5H0 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 PCDHGA2Q9Y5H1 932 aa6.12□□□□□ -1.43
COPS3-209ENST00000486810 ZMYM3Q14202 1370 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 RPTORQ8N122 1335 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 PABPN1LA6NDY0 278 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 CAPN14A8MX76 684 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 CHL1O00533 1208 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 MATN3O15232 486 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 ADCY6O43306 1168 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 HOXA3O43365 443 aaPredicted RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 MT-CO1P00395 513 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 AGXTP21549 392 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 YY1P25490 414 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 HIBADHP31937 336 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 RABGGTBP53611 331 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 DUSP2Q05923 314 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 WASHC5Q12768 1159 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 MRPL49Q13405 166 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 ELAVL1Q15717 326 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 CSRP2Q16527 193 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 KIAA0753Q2KHM9 967 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 ABCB5Q2M3G0 1257 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 MST1LQ2TV78 715 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 Q6ZRM9 215 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 SGMS1Q86VZ5 419 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 CCDC65Q8IXS2 484 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 C10orf67Q8IYJ2 551 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 IL17DQ8TAD2 202 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 EXTL1Q92935 676 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 NACC2Q96BF6 587 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 THOC1Q96FV9 657 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 FAM81BQ96LP2 452 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 CDK5RAP1Q96SZ6 601 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 LSM14BQ9BX40 385 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 TRIM6Q9C030 488 aaPredicted RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 LRRC27Q9C0I9 530 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 RPAP3Q9H6T3 665 aaPredicted RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 HOMER3Q9NSC5 361 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 ZMAT5Q9UDW3 170 aaKnown RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.11□□□□□ -1.43
COPS3-209ENST00000486810 ATP6V0A2Q9Y487 856 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 GPR45Q9Y5Y3 372 aa6.11□□□□□ -1.43
COPS3-209ENST00000486810 V9GYY5 206 aaPredicted RBP6.11□□□□□ -1.43
COPS3-209ENST00000486810 SMG6Q86US8 1419 aaKnown RBP6.1□□□□□ -1.43
COPS3-209ENST00000486810 BRD4O60885 1362 aaPredicted RBP6.1□□□□□ -1.43
COPS3-209ENST00000486810 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 NRP1O14786 923 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 RTN2O75298 545 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 MTRF1O75570 445 aaKnown RBP6.1□□□□□ -1.43
COPS3-209ENST00000486810 ITGA10O75578 1167 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 NEBLO76041 1014 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 MTHFD2P13995 350 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 GCFC2P16383 781 aaKnown RBP6.1□□□□□ -1.43
COPS3-209ENST00000486810 ACRV1P26436 265 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 SCNN1GP51170 649 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 NSUN2Q08J23 767 aaKnown RBP eCLIP6.1□□□□□ -1.43
COPS3-209ENST00000486810 CLPPQ16740 277 aaPredicted RBP6.1□□□□□ -1.43
COPS3-209ENST00000486810 ANO4Q32M45 955 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 KBTBD12Q3ZCT8 623 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 TEX35Q5T0J7 233 aa6.1□□□□□ -1.43
COPS3-209ENST00000486810 PACS1Q6VY07 963 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms