RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 NPLOC4Q8TAT6 608 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 RNPC3Q96LT9 517 aaKnown RBP12.78□□□□□ -0.36
PKP4-213ENST00000486254 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 BCO2Q9BYV7 579 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 PDZD7Q9H5P4 517 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 EHD2Q9NZN4 543 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 PCDHGC3Q9UN70 934 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 C2CD2Q9Y426 696 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 PCDHB4Q9Y5E5 795 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 SCINQ9Y6U3 715 aa12.78□□□□□ -0.36
PKP4-213ENST00000486254 A0A1B0GUA9 196 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.77□□□□□ -0.36
PKP4-213ENST00000486254 IQCF3P0C7M6 154 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 ZNF286BP0CG31 522 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 MAN1A1P33908 653 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 PEX5P50542 639 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 ZNF699Q32M78 642 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 MARCH8Q5T0T0 291 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.36
PKP4-213ENST00000486254 CHADLQ6NUI6 762 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 TMEM270Q6UE05 265 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 MAATS1Q7Z4T9 603 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 ZBTB33Q86T24 672 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 CCDC26Q8TAB7 109 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 WHAMMQ8TF30 809 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 TSPAN18Q96SJ8 248 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 MRPL47Q9HD33 250 aaKnown RBP12.77□□□□□ -0.36
PKP4-213ENST00000486254 ACP6Q9NPH0 428 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 CNOT8Q9UFF9 292 aaKnown RBP12.77□□□□□ -0.36
PKP4-213ENST00000486254 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.36
PKP4-213ENST00000486254 AKT3Q9Y243 479 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 DERAQ9Y315 318 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 PCDHA3Q9Y5H8 950 aa12.77□□□□□ -0.36
PKP4-213ENST00000486254 MGAMO43451 1857 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 A0A087WZ62 844 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 SMIM35A0A1B0GVV1 85 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 KRIT1O00522 736 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 B4GALT5O43286 388 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.37
PKP4-213ENST00000486254 PAEPP09466 180 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 HARSP12081 509 aaKnown RBP12.77□□□□□ -0.37
PKP4-213ENST00000486254 ASPAP45381 313 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 CBX1P83916 185 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 PLEKHA7Q6IQ23 1121 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 C17orf99Q6UX52 265 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 KIAA0319LQ8IZA0 1049 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 ALG3Q92685 438 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 KRT12Q99456 494 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 APBA2Q99767 749 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
PKP4-213ENST00000486254 ADPGKQ9BRR6 497 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 PLEKHA5Q9HAU0 1116 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
PKP4-213ENST00000486254 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
PKP4-213ENST00000486254 GPR25O00155 361 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 HAS3O00219 553 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 IGF2BP3O00425 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
PKP4-213ENST00000486254 SART1O43290 800 aaKnown RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 RAD51CO43502 376 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 TSPAN1O60635 241 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 FGGP02679 453 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 CALB1P05937 261 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 SLC10A3P09131 477 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 ZNF865P0CJ78 1059 aaPredicted RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 STAG3L1P0CL83 205 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 MYBL2P10244 700 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 ARF4P18085 180 aaPredicted RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 COMTP21964 271 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 EIF4BP23588 611 aaKnown RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 GBP1P32455 592 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 RGS2P41220 211 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 GRM5P41594 1212 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 GSCP56915 257 aaPredicted RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 MYL6P60660 151 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 TFAMQ00059 246 aaKnown RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 TAP1Q03518 808 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 DHX34Q14147 1143 aaKnown RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 TAF1CQ15572 869 aaPredicted RBP12.76□□□□□ -0.37
PKP4-213ENST00000486254 CYP1B1Q16678 543 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 GLIPR1L2Q4G1C9 344 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 SEL1L2Q5TEA6 688 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 THNSL1Q8IYQ7 743 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 FAM71BQ8TC56 605 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 HDAC7Q8WUI4 952 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 HPCAL4Q9UM19 191 aa12.76□□□□□ -0.37
PKP4-213ENST00000486254 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 FAM187AA6NFU0 413 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 PSTPIP1O43586 416 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 CAPN15O75808 1086 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 ERLIN2O94905 339 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 CST3P01034 146 aaPredicted RBP12.75□□□□□ -0.37
PKP4-213ENST00000486254 GJB1P08034 283 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 GLI1P08151 1106 aa12.75□□□□□ -0.37
PKP4-213ENST00000486254 CXCL8P10145 99 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms