RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ZNF174Q15697 407 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 ME3Q16798 604 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 CTXN3Q4LDR2 81 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 LAIR1Q6GTX8 287 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 VITQ6UXI7 678 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 ALKAL1Q6UXT8 129 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 PRR23BQ6ZRT6 265 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 PDZD4Q76G19 769 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 APBB1IPQ7Z5R6 666 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 ELMOD1Q8N336 334 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 NSUN7Q8NE18 718 aaKnown RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 ERMNQ8TAM6 284 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 SMARCD2Q92925 531 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 ZNF512Q96ME7 567 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 ZMAT2Q96NC0 199 aaKnown RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 CCDC94Q9BW85 323 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 TRPV5Q9NQA5 729 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 TOPORSQ9NS56 1045 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 FBXL5Q9UKA1 691 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 TNFSF13BQ9Y275 285 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 INSL5Q9Y5Q6 135 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.1□□□□□ -1.11
CSDE1-206ENST00000483030 PIAS3Q9Y6X2 628 aa8.1□□□□□ -1.11
CSDE1-206ENST00000483030 CACNA1BQ00975 2339 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 ZNF263O14978 683 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 SYN3O14994 580 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 HRO43593 1189 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 JAK2O60674 1132 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 MOSPD3O75425 235 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 LARGE1O95461 756 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 RETP07949 1114 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 CHRNB1P11230 501 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 MYL4P12829 197 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 CCNE1P24864 410 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 RPL9P32969 192 aaKnown RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 CCT6AP40227 531 aaKnown RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 GRM5P41594 1212 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 CCR3P51677 355 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 SATB1Q01826 763 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 TWF1Q12792 350 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 SIM2Q14190 667 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 MRPL58Q14197 206 aaKnown RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 GAS6Q14393 721 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 ANKRD1Q15327 319 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 ECM1Q16610 540 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 XKR4Q5GH76 650 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 TPGS2Q68CL5 300 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 IQCEQ6IPM2 695 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 GPIHBP1Q8IV16 184 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 ZSCAN18Q8TBC5 510 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 KIFAP3Q92845 792 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 C18orf25Q96B23 403 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 ACAP3Q96P50 834 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 ACO2Q99798 780 aaKnown RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 IER2Q9BTL4 223 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 TARS2Q9BW92 718 aaKnown RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 CDT1Q9H211 546 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 PTPRHQ9HD43 1115 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 SLC38A7Q9NVC3 462 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 CEP72Q9P209 647 aa8.09□□□□□ -1.11
CSDE1-206ENST00000483030 MTCL1Q9Y4B5 1905 aaKnown RBP8.09□□□□□ -1.11
CSDE1-206ENST00000483030 TDRD15B5MCY1 1934 aaKnown RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 HEPACAM2A8MVW5 462 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 CHURC1-FNTBB4DL54 471 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 SLC30A4O14863 429 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 ADRB1P08588 477 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 OR52Z1P0C646 297 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 KCNE1P15382 129 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 MARCKSP29966 332 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 MCM4P33991 863 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 NPTX2P47972 431 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 FNTBP49356 437 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 PEX3P56589 373 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 GUCY1B3Q02153 619 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 DMWDQ09019 674 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 SRSF5Q13243 272 aaKnown RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 SAFBQ15424 915 aaKnown RBP eCLIP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 TEAD2Q15562 447 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 ZNF568Q3ZCX4 644 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 PPM1JQ5JR12 505 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 HEATR6Q6AI08 1181 aaKnown RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 ZNF280DQ6N043 979 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 MFSD6LQ8IWD5 586 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 YAF2Q8IY57 180 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 LEMD2Q8NC56 503 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 NETO1Q8TDF5 533 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 CSGALNACT1Q8TDX6 532 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 DEPDC1BQ8WUY9 529 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 DDX12PQ92771 950 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 GTF3C6Q969F1 213 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 RSPRY1Q96DX4 576 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 CHAMP1Q96JM3 812 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 ZBTB45Q96K62 511 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-206ENST00000483030 PKNOX2Q96KN3 472 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 SUSD3Q96L08 255 aa8.08□□□□□ -1.12
CSDE1-206ENST00000483030 TBC1D32Q96NH3 1257 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms