RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 PSMC3P17980 439 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 NNTQ13423 1086 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 HIST2H2ACQ16777 129 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-205ENST00000481474 HIST2H2AA3Q6FI13 130 aa12.14□□□□□ -0.47
TRIM27-205ENST00000481474 HSD17B4P51659 736 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 GALNTL6Q49A17 601 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 IER5Q5VY09 327 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 KIAA1586Q9HCI6 787 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 TSC22D4Q9Y3Q8 395 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 DAB1O75553 588 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 ASNSP08243 561 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 NPY2RP49146 381 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 VSNL1P62760 191 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 ASPRV1Q53RT3 343 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 KATNAL1Q9BW62 490 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 KLHL1Q9NR64 748 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 AGAP1Q9UPQ3 857 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 TCEA3O75764 348 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 PFKFB1P16118 471 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 GNA15P30679 374 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 PTPN7P35236 360 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 CDH6P55285 790 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 GPS1Q13098 491 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SURF1Q15526 300 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 DNAJC11Q9NVH1 559 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 INTS10Q9NVR2 710 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SMPD4Q9NXE4 827 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 HEATR9A2RTY3 570 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SEC31AO94979 1220 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 TDRD10Q5VZ19 366 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SH3GL2Q99962 352 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 OMDQ99983 421 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 CENPSQ8N2Z9 138 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 TIMM8BQ9Y5J9 83 aaPredicted RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L15C9J2P7 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L13C9JLJ4 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L11C9JVI0 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L18D6R9N7 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L22D6RA61 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L17D6RBQ6 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L19D6RCP7 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L20D6RJB6 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 PRMT3O60678 531 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L24Q0WX57 530 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 NPATQ14207 1427 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SEPT2Q15019 361 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 KRT31Q15323 416 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 USP17L6PQ6QN14 398 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 BLOC1S5Q8TDH9 187 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 CINPQ9BW66 212 aaPredicted RBP12.13□□□□□ -0.47
TRIM27-205ENST00000481474 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
TRIM27-205ENST00000481474 TYK2P29597 1187 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 GRK3P35626 688 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 PCDHA6Q9UN73 950 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 PCDHA8Q9Y5H6 950 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 NR2E3Q9Y5X4 410 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 NCOA2Q15596 1464 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 ULK3Q6PHR2 472 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 UBA3Q8TBC4 463 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 WDR60Q8WVS4 1066 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 NCKAP1Q9Y2A7 1128 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 AKT2P31751 481 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 RHAGQ02094 409 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 KLHL40Q2TBA0 621 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 PGLYRP2Q96PD5 576 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 SH3GL1Q99961 368 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 SPRTNQ9H040 489 aaPredicted RBP12.12□□□□□ -0.47
TRIM27-205ENST00000481474 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 CACNA1FO60840 1977 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 CTNND1O60716 968 aaKnown RBP12.12□□□□□ -0.47
TRIM27-205ENST00000481474 POLD3Q15054 466 aaPredicted RBP12.12□□□□□ -0.47
TRIM27-205ENST00000481474 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 COLGALT2Q8IYK4 626 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 TBCDQ9BTW9 1192 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 FANCLQ9NW38 375 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 WWOXQ9NZC7 414 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 SAE1Q9UBE0 346 aaPredicted RBP12.12□□□□□ -0.47
TRIM27-205ENST00000481474 SPATA2Q9UM82 520 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 NOVA2Q9UNW9 492 aaKnown RBP12.12□□□□□ -0.47
TRIM27-205ENST00000481474 H3BRB1 525 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 ANGPT2O15123 496 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 GYG2O15488 501 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 GUCY1B2O75343 617 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 PEX14O75381 377 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 KRT75O95678 551 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 CYP2F1P24903 491 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 HDAC4P56524 1084 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 ACOX1Q15067 660 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 DPP10Q8N608 796 aa12.12□□□□□ -0.47
TRIM27-205ENST00000481474 CCDC197Q8NCU1 140 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms