RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 VARS2Q5ST30 1063 aaKnown RBP21.86■■□□□ 1.09
VPS36-204ENST00000480923 ARMCX5Q6P1M9 558 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 CRELD2Q6UXH1 353 aaPredicted RBP21.86■■□□□ 1.09
VPS36-204ENST00000480923 C15orf39Q6ZRI6 1047 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 SUSD3Q96L08 255 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 CBWD1Q9BRT8 395 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 C1QTNF1Q9BXJ1 281 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 PCIF1Q9H4Z3 704 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 GDPD2Q9HCC8 539 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 BACE2Q9Y5Z0 518 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 CDY1Q9Y6F8 540 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 TRIP11Q15643 1979 aa21.86■■□□□ 1.09
VPS36-204ENST00000480923 PVALEFA0A1B0GWK0 134 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 GOLGA8IPA6NC78 632 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 GOLGA8JA6NMD2 632 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 EIF3DO15371 548 aaKnown RBP eCLIP21.85■■□□□ 1.09
VPS36-204ENST00000480923 DCXO43602 365 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 IL18RAPO95256 599 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 RAB33AQ14088 237 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 LIN9Q5TKA1 542 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 ZSWIM2Q8NEG5 633 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 APPL2Q8NEU8 664 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 SMG7Q92540 1137 aaKnown RBP21.85■■□□□ 1.09
VPS36-204ENST00000480923 PAGE5Q96GU1 130 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 ZDHHC7Q9NXF8 308 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 USP25Q9UHP3 1055 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 MUTYHQ9UIF7 546 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 FBXW11Q9UKB1 542 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 PCDHB8Q9UN66 801 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 HPSEQ9Y251 543 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 C2CD2Q9Y426 696 aa21.85■■□□□ 1.09
VPS36-204ENST00000480923 H7C4K7 107 aa21.84■■□□□ 1.09
VPS36-204ENST00000480923 SYKP43405 635 aa21.84■■□□□ 1.09
VPS36-204ENST00000480923 RSPO2Q6UXX9 243 aaPredicted RBP21.84■■□□□ 1.09
VPS36-204ENST00000480923 DSTYKQ6XUX3 929 aa21.84■■□□□ 1.09
VPS36-204ENST00000480923 CCDC149Q6ZUS6 474 aa21.84■■□□□ 1.09
VPS36-204ENST00000480923 FSIP1Q8NA03 581 aa21.84■■□□□ 1.09
VPS36-204ENST00000480923 PIDD1Q9HB75 910 aa21.84■■□□□ 1.09
VPS36-204ENST00000480923 NCOR1O75376 2440 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 C2CD4DB7Z1M9 353 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 PPEF2O14830 753 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 EXTL3O43909 919 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 ZMYND10O75800 440 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 NDUFA8P51970 172 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 ARPP19P56211 112 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 EHHADHQ08426 723 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 CTXN3Q4LDR2 81 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 CYP26C1Q6V0L0 522 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 EPM2AIP1Q7L775 607 aaPredicted RBP21.83■■□□□ 1.09
VPS36-204ENST00000480923 BRSK2Q8IWQ3 736 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 NELFCDQ8IXH7 590 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 ZNF507Q8TCN5 953 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 ZNF707Q96C28 371 aaPredicted RBP21.83■■□□□ 1.09
VPS36-204ENST00000480923 SLC39A2Q9NP94 309 aa21.83■■□□□ 1.09
VPS36-204ENST00000480923 RBAKQ9NYW8 714 aaPredicted RBP21.83■■□□□ 1.09
VPS36-204ENST00000480923 BDP1A6H8Y1 2624 aa21.83■■□□□ 1.08
VPS36-204ENST00000480923 PLXNA3P51805 1871 aa21.83■■□□□ 1.08
VPS36-204ENST00000480923 C5orf42Q9H799 3197 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 A0A1W2PQ27 194 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 A0A1W2PQ64 194 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 A0A1W2PQD8 194 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 C8AP07357 584 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 PPM1LQ5SGD2 360 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 C9orf57Q5W0N0 161 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 ZNF280DQ6N043 979 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 EFCAB13Q8IY85 973 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 GPD1LQ8N335 351 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 TDRD5Q8NAT2 981 aaKnown RBP21.82■■□□□ 1.08
VPS36-204ENST00000480923 PRKD2Q9BZL6 878 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 EXOC1Q9NV70 894 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 DPP3Q9NY33 737 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 FBXL5Q9UKA1 691 aa21.82■■□□□ 1.08
VPS36-204ENST00000480923 TIMM13Q9Y5L4 95 aaPredicted RBP21.82■■□□□ 1.08
VPS36-204ENST00000480923 UBE4BO95155 1302 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 FAM237AA0A1B0GTK4 181 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 M0QZQ0 153 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 KIAA0391O15091 583 aaKnown RBP21.81■■□□□ 1.08
VPS36-204ENST00000480923 HOXD13P35453 343 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 AARSP49588 968 aaKnown RBP eCLIP21.81■■□□□ 1.08
VPS36-204ENST00000480923 TFAMQ00059 246 aaKnown RBP21.81■■□□□ 1.08
VPS36-204ENST00000480923 ROR1Q01973 937 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 MRPL58Q14197 206 aaKnown RBP21.81■■□□□ 1.08
VPS36-204ENST00000480923 SLC8B1Q6J4K2 584 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 NT5DC4Q86YG4 428 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 SLC7A14Q8TBB6 771 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 SCFD1Q8WVM8 642 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 RHOBTB2Q9BYZ6 727 aa21.81■■□□□ 1.08
VPS36-204ENST00000480923 VWA8A3KMH1 1905 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 PDCD11Q14690 1871 aaKnown RBP21.8■■□□□ 1.08
VPS36-204ENST00000480923 FAM86C2PA6NEL3 165 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 PIRO00625 290 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 KLRC4O43908 158 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 WNT7BP56706 349 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 LILRA4P59901 499 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 YWHAHQ04917 246 aaPredicted RBP21.8■■□□□ 1.08
VPS36-204ENST00000480923 TMEM31Q5JXX7 168 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 OTOP3Q7RTS5 596 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 USP37Q86T82 979 aa21.8■■□□□ 1.08
VPS36-204ENST00000480923 ACSF2Q96CM8 615 aaPredicted RBP21.8■■□□□ 1.08
VPS36-204ENST00000480923 GOLPH3LQ9H4A5 285 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms