RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 WDR44Q5JSH3 913 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 IZUMO3Q5VZ72 239 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 SV2AQ7L0J3 742 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 RHOT1Q8IXI2 618 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 LARGE2Q8N3Y3 721 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 TMEM161BQ8NDZ6 487 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 SUPT20HQ8NEM7 779 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 DHX38Q92620 1227 aaKnown RBP9.24□□□□□ -0.93
PKP4-210ENST00000480171 MRPL47Q9HD33 250 aaKnown RBP9.24□□□□□ -0.93
PKP4-210ENST00000480171 PLSCR2Q9NRY7 297 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 DNAJC17Q9NVM6 304 aaKnown RBP9.24□□□□□ -0.93
PKP4-210ENST00000480171 AGAP1Q9UPQ3 857 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 PCDHB2Q9Y5E7 798 aa9.24□□□□□ -0.93
PKP4-210ENST00000480171 SCN9AQ15858 1988 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 ASTN2O75129 1339 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 IGF2BP3O00425 579 aaKnown RBP eCLIP9.23□□□□□ -0.933e-6■■■□□ 18.9
PKP4-210ENST00000480171 TP73O15350 636 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 PSTPIP1O43586 416 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 UNGP13051 313 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 CREB1P16220 341 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 RRM1P23921 792 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 CAP2P40123 477 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 PTGER2P43116 358 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 NPTX2P47972 431 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 CLNS1AP54105 237 aaKnown RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 KRT76Q01546 638 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 TBC1D10BQ4KMP7 808 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 PPP1R2P3Q6NXS1 205 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 GSTA5Q7RTV2 222 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 SRRM1Q8IYB3 904 aaKnown RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 GPD1LQ8N335 351 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 SAMD3Q8N6K7 520 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 IL31RAQ8NI17 732 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 FBF1Q8TES7 1133 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 CFAP57Q96MR6 1250 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 SH2D3AQ9BRG2 576 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 C17orf75Q9HAS0 396 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 MLXIPLQ9NP71 852 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 NOP53Q9NZM5 478 aaKnown RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 CTNNAL1Q9UBT7 734 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 GGT7Q9UJ14 662 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 NAALADL1Q9UQQ1 740 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 MROH7Q68CQ1 1323 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 COL11A2P13942 1736 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 CLRN2A0PK11 232 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 RALAP11233 206 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 CCND1P24385 295 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 DLGAP5Q15398 846 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 ZKSCAN8Q15776 578 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 RNF43Q68DV7 783 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 TRIM72Q6ZMU5 477 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 TRMT1LQ7Z2T5 733 aaKnown RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 RELL1Q8IUW5 271 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 FLAD1Q8NFF5 587 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 FBXL18Q96ME1 805 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 RAB3IPQ96QF0 476 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 KIAA1586Q9HCI6 787 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 TOPORSQ9NS56 1045 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 COL20A1Q9P218 1284 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 ZNF70Q9UC06 446 aaPredicted RBP9.23□□□□□ -0.93
PKP4-210ENST00000480171 TBK1Q9UHD2 729 aa9.23□□□□□ -0.93
PKP4-210ENST00000480171 SPDYE2BA6NHP3 402 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 NFIBO00712 420 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 DKC1O60832 514 aaKnown RBP eCLIP9.22□□□□□ -0.93
PKP4-210ENST00000480171 ATP5HO75947 161 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 ABHD2P08910 425 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 SPDYE6P0CI01 402 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 ALADP13716 330 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 GARTP22102 1010 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 CALRP27797 417 aaKnown RBP9.22□□□□□ -0.93
PKP4-210ENST00000480171 ABCD1P33897 745 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 SKIV2L2P42285 1042 aaKnown RBP9.22□□□□□ -0.93
PKP4-210ENST00000480171 SSR1P43307 286 aaKnown RBP9.22□□□□□ -0.93
PKP4-210ENST00000480171 ALDH5A1P51649 535 aaPredicted RBP9.22□□□□□ -0.93
PKP4-210ENST00000480171 KCNJ2P63252 427 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 ATP11AP98196 1134 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 CCDC15Q0P6D6 951 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 CRYMQ14894 314 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 SETDB1Q15047 1291 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 MTFR1Q15390 333 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 UGCGQ16739 394 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 PLA2G4FQ68DD2 849 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 RDM1Q8NG50 284 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 CPA5Q8WXQ8 436 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 BICD1Q96G01 975 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 TTC25Q96NG3 672 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 HEMGNQ9BXL5 484 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 PITPNM3Q9BZ71 974 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 OSBPL8Q9BZF1 889 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 EBF2Q9HAK2 575 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 UBN1Q9NPG3 1134 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 TXLNGQ9NUQ3 528 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 PRKAG3Q9UGI9 489 aa9.22□□□□□ -0.93
PKP4-210ENST00000480171 FBXO9Q9UK97 447 aaPredicted RBP9.22□□□□□ -0.93
PKP4-210ENST00000480171 TRPC5Q9UL62 973 aaPredicted RBP9.22□□□□□ -0.93
PKP4-210ENST00000480171 SCINQ9Y6U3 715 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms