RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 DDX12PQ92771 950 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 FGF14Q92915 247 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 EPSTI1Q96J88 318 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 RTP3Q9BQQ7 232 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 MSTO1Q9BUK6 570 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 RPF1Q9H9Y2 349 aaKnown RBP15.6■□□□□ 0.09
ATG4B-218ENST00000479554 DNMT3BQ9UBC3 853 aaKnown RBP15.6■□□□□ 0.09
ATG4B-218ENST00000479554 FBXL5Q9UKA1 691 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 KCNH3Q9ULD8 1083 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 UBQLN1Q9UMX0 589 aaKnown RBP15.6■□□□□ 0.09
ATG4B-218ENST00000479554 PCDHB8Q9UN66 801 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 VPS13AQ96RL7 3174 aa15.6■□□□□ 0.09
ATG4B-218ENST00000479554 ARHGEF37A1IGU5 675 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 KRBA1A5PL33 1030 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 FAM189A1O60320 539 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 ABLIM3O94929 683 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 ATF2P15336 505 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 SYT1P21579 422 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 MARCKSP29966 332 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 NMT1P30419 496 aaKnown RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 LRPAP1P30533 357 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 TXLNAP40222 546 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 MRPL58Q14197 206 aaKnown RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 ENOX2Q16206 610 aaKnown RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 SPECC1Q5M775 1068 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 ZBTB41Q5SVQ8 909 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 PARM1Q6UWI2 310 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 MAP4K3Q8IVH8 894 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 KRI1Q8N9T8 703 aaKnown RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 CYP4F11Q9HBI6 524 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 SLC2A4RGQ9NR83 387 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 STK17AQ9UEE5 414 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 CCDC39Q9UFE4 941 aa15.59■□□□□ 0.09
ATG4B-218ENST00000479554 FBXO2Q9UK22 296 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 MRPS23Q9Y3D9 190 aaKnown RBP15.59■□□□□ 0.09
ATG4B-218ENST00000479554 DOCK6Q96HP0 2047 aa15.58■□□□□ 0.09
ATG4B-218ENST00000479554 A0A0B4J269 797 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 LACTBL1A8MY62 500 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 PI15O43692 258 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 RHOP08100 348 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 CPB1P15086 417 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 CYP3A5P20815 502 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 NUCB2P80303 420 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 GTF2BQ00403 316 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 TPGS2Q68CL5 300 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 FAM173BQ6P4H8 233 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 USP49Q70CQ1 688 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 NPAS3Q8IXF0 933 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 TCEAL8Q8IYN2 117 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 TMEM130Q8N3G9 435 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 ING5Q8WYH8 240 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 FIZ1Q96SL8 496 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 ARHGEF3Q9NR81 526 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.08
ATG4B-218ENST00000479554 INSL5Q9Y5Q6 135 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 CACNA1HO95180 2353 aa15.58■□□□□ 0.08
ATG4B-218ENST00000479554 DMDP11532 3685 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 M0QZQ0 153 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 PTPN2P17706 415 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 CEBPZQ03701 1054 aaKnown RBP15.57■□□□□ 0.08
ATG4B-218ENST00000479554 YWHAHQ04917 246 aaPredicted RBP15.57■□□□□ 0.08
ATG4B-218ENST00000479554 ZBTB6Q15916 424 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 SLC39A4Q6P5W5 647 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 DSTYKQ6XUX3 929 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 DYMQ7RTS9 669 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 CD302Q8IX05 232 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 CCDC105Q8IYK2 499 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 BEST2Q8NFU1 509 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 FAM212AQ96EL1 285 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 CLIC6Q96NY7 704 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 TSPAN18Q96SJ8 248 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 RPP25Q9BUL9 199 aaKnown RBP15.57■□□□□ 0.08
ATG4B-218ENST00000479554 ST6GALNAC4Q9H4F1 302 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 TBC1D17Q9HA65 648 aa15.57■□□□□ 0.08
ATG4B-218ENST00000479554 CPSF3Q9UKF6 684 aaKnown RBP15.57■□□□□ 0.08
ATG4B-218ENST00000479554 MYH15Q9Y2K3 1946 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 SEC24AO95486 1093 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 CEBPBP17676 345 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 AARSP49588 968 aaKnown RBP eCLIP15.56■□□□□ 0.08
ATG4B-218ENST00000479554 GUCY2FP51841 1108 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 ADCY1Q08828 1119 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 NFKBIBQ15653 356 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 SLC5A9Q2M3M2 681 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 ZC2HC1CQ53FD0 456 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-218ENST00000479554 RRAGBQ5VZM2 374 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 PHLDB3Q6NSJ2 640 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 USP37Q86T82 979 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 SFR1Q86XK3 245 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 ELMOD1Q8N336 334 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 DTWD2Q8NBA8 298 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 HVCN1Q96D96 273 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 KXD1Q9BQD3 176 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 CORO1BQ9BR76 489 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 AVENQ9NQS1 362 aaPredicted RBP15.56■□□□□ 0.08
ATG4B-218ENST00000479554 AFF4Q9UHB7 1163 aaKnown RBP15.56■□□□□ 0.08
ATG4B-218ENST00000479554 MAFFQ9ULX9 164 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
ATG4B-218ENST00000479554 TIMM13Q9Y5L4 95 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms