RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 UBE2CO00762 179 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 CAPN9O14815 690 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 HTRA2O43464 458 aaPredicted RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 KIF5CO60282 957 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MSCO60682 206 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 C8AP07357 584 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 QDPRP09417 244 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 ACADMP11310 421 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 FGFR2P21802 821 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MAPK4P31152 587 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 PRPHP41219 470 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 CCR9P51686 369 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 NLRP5P59047 1200 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 ST5P78524 1137 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MRPS9P82933 396 aaKnown RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 RBP5P82980 135 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 LACTBP83111 547 aaPredicted RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 AKAP17AQ02040 695 aaKnown RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 RING1Q06587 406 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MRPL28Q13084 256 aaKnown RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 WSCD2Q2TBF2 565 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 CTXN3Q4LDR2 81 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 FLYWCH1Q4VC44 716 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 VWA3BQ502W6 1294 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MUM1L1Q5H9M0 696 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 C1orf141Q5JVX7 400 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 SLC9C2Q5TAH2 1124 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MBNL2Q5VZF2 373 aaKnown RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 RAB12Q6IQ22 244 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 CYP4F22Q6NT55 531 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 C11orf88Q6PI97 169 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 BTNL9Q6UXG8 535 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 RTN4RL1Q86UN2 441 aaPredicted RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 SESTD1Q86VW0 696 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 CHD1LQ86WJ1 897 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 SIRT2Q8IXJ6 389 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 TBC1D21Q8IYX1 336 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 SPC24Q8NBT2 197 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 ZNF540Q8NDQ6 660 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MOSPD2Q8NHP6 518 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 BICD2Q8TD16 824 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 FEM1CQ96JP0 617 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 HGH1Q9BTY7 390 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 MBNL3Q9NUK0 354 aaKnown RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 PCDHGB4Q9UN71 923 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 PLAGL2Q9UPG8 496 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 TMEM5Q9Y2B1 443 aa6.45□□□□□ -1.38
RC3H1-204ENST00000479099 GPR55Q9Y2T6 319 aaPredicted RBP6.45□□□□□ -1.38
RC3H1-204ENST00000479099 GTPBP1O00178 669 aaKnown RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 DVL2O14641 736 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 MTSS1O43312 755 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 KRT37O76014 449 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 RNASE1P07998 156 aaKnown RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 ITGA5P08648 1049 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CD40P25942 277 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CD96P40200 585 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 AFMP43652 599 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 MAP2K6P52564 334 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 AMPD2Q01433 879 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CREB5Q02930 508 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 KIZQ2M2Z5 673 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 ANKDD1AQ495B1 522 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 PAN2Q504Q3 1202 aaKnown RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 NBPF12Q5TAG4 269 aaPredicted RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 SULT6B1Q6IMI4 303 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 KDELC1Q6UW63 502 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 C12orf40Q86WS4 652 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 LURAP1LQ8IV03 231 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 RNF168Q8IYW5 571 aaPredicted RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 NPLOC4Q8TAT6 608 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CYP2W1Q8TAV3 490 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 GDAP1Q8TB36 358 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 DENND1AQ8TEH3 1009 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 EID2BQ96D98 161 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 KIF1BPQ96EK5 621 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CHFRQ96EP1 664 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CCDC43Q96MW1 224 aaKnown RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 FSD1Q9BTV5 496 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CD244Q9BZW8 370 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 SYNCQ9H7C4 482 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 INTS10Q9NVR2 710 aaKnown RBP6.44□□□□□ -1.38
RC3H1-204ENST00000479099 DKK3Q9UBP4 350 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 FBXL5Q9UKA1 691 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CNPY2Q9Y2B0 182 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 SNX11Q9Y5W9 270 aa6.44□□□□□ -1.38
RC3H1-204ENST00000479099 CARMIL2Q6F5E8 1435 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 BOLA2-SMG1P6H3BVE0 249 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 IGF2BP3O00425 579 aaKnown RBP eCLIP6.43□□□□□ -1.38
RC3H1-204ENST00000479099 AP3D1O14617 1153 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 FANCGO15287 622 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 IPO8O15397 1037 aaKnown RBP6.43□□□□□ -1.38
RC3H1-204ENST00000479099 SGSM2O43147 1006 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 TSPAN9O75954 239 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 USP1O94782 785 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 CSF1P09603 554 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 CSH1P0DML2 217 aa6.43□□□□□ -1.38
RC3H1-204ENST00000479099 CSH2P0DML3 217 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms