RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 ADKP55263 362 aaKnown RBP6.5□□□□□ -1.37
CCDC171-207ENST00000478913 PPP3CAQ08209 521 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 MGAT2Q10469 447 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 PKN2Q16513 984 aaKnown RBP6.5□□□□□ -1.37
CCDC171-207ENST00000478913 MST1LQ2TV78 715 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 UAP1L1Q3KQV9 507 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 MIER2Q8N344 545 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 OR5M3Q8NGP4 307 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 NRG4Q8WWG1 115 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 TCF25Q9BQ70 676 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 CSRNP2Q9H175 543 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 ZIM2Q9NZV7 527 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 GIT1Q9Y2X7 761 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 EEA1Q15075 1411 aa6.5□□□□□ -1.37
CCDC171-207ENST00000478913 ARHGEF5Q12774 1597 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 PRXQ9BXM0 1461 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 UBE2QL1A1L167 161 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 GPR42O15529 346 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ITGA10O75578 1167 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 DDNO94850 711 aaPredicted RBP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ENDOD1O94919 500 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ZRANB2O95218 330 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ZSCAN20P17040 1043 aaPredicted RBP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 CASRP41180 1078 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 CTSWP56202 376 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 PER3P56645 1201 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 DUSP8Q13202 625 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 GRM7Q14831 915 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 RAVER1Q8IY67 606 aaKnown RBP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ARL8AQ96BM9 186 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 HSPBAP1Q96EW2 488 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 TMEM176AQ96HP8 235 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 UHRF1Q96T88 793 aaPredicted RBP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 PRO3102Q9H379 93 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 AGO3Q9H9G7 860 aaKnown RBP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 TCF7L1Q9HCS4 588 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 DDX21Q9NR30 783 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 GPRC5DQ9NZD1 345 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ZNF180Q9UJW8 692 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 HDAC9Q9UKV0 1011 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 INTUQ9ULD6 942 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 ZFR2Q9UPR6 939 aaKnown RBP6.49□□□□□ -1.37
CCDC171-207ENST00000478913 BCL9O00512 1426 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 TRANK1O15050 2925 aa6.49□□□□□ -1.37
CCDC171-207ENST00000478913 NRXN1Q9ULB1 1477 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 GASTP01350 101 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 ITGB3P05106 788 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 HMGB1P09429 215 aaKnown RBP6.48□□□□□ -1.37
CCDC171-207ENST00000478913 PF4V1P10720 104 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 VCAM1P19320 739 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 CRHR1P34998 444 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 PPP2R5AQ15172 486 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 MIGA2Q7L4E1 593 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 FUKQ8N0W3 1084 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 DPF2Q92785 391 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 COA7Q96BR5 231 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 CDC5LQ99459 802 aaKnown RBP6.48□□□□□ -1.37
CCDC171-207ENST00000478913 C7orf25Q9BPX7 421 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 RTFDC1Q9BY42 306 aaPredicted RBP6.48□□□□□ -1.37
CCDC171-207ENST00000478913 RHOBTB2Q9BYZ6 727 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 CDH19Q9H159 772 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 BCO1Q9HAY6 547 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 ANKRD6Q9Y2G4 727 aa6.48□□□□□ -1.37
CCDC171-207ENST00000478913 CENPFP49454 3210 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 EXOC5O00471 708 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 RAD17O75943 681 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 KCNA3P22001 575 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 WASP42768 502 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 Q6ZVL8 140 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 PDZD4Q76G19 769 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 SYNE4Q8N205 404 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 LILRA3Q8N6C8 439 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 OR7D4Q8NG98 312 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 CXorf38Q8TB03 319 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 JPH3Q8WXH2 748 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 HOXB13Q92826 284 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 HDAC10Q969S8 669 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 IL17RAQ96F46 866 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 RBM15Q96T37 977 aaKnown RBP eCLIP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 SSBP3Q9BWW4 388 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 EPC1Q9H2F5 836 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 TAF1DQ9H5J8 278 aaPredicted RBP6.47□□□□□ -1.37
CCDC171-207ENST00000478913 PLA2G3Q9NZ20 509 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 TRPS1Q9UHF7 1281 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 SERPINB13Q9UIV8 391 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 SLC30A1Q9Y6M5 507 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 CEP290O15078 2479 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 LAMA3Q16787 3333 aa6.47□□□□□ -1.37
CCDC171-207ENST00000478913 ADCY6O43306 1168 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 FOXS1O43638 330 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 SCGB1D2O95969 90 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 MSX2P35548 267 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-207ENST00000478913 GZMKP49863 264 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 PLP2Q04941 152 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 SEPT2Q15019 361 aa6.46□□□□□ -1.38
CCDC171-207ENST00000478913 NFE2Q16621 373 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms