RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 GBP1P32455 592 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 CIITAP33076 1130 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 OR1D2P34982 312 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 CCR2P41597 374 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 SPIRE1Q08AE8 756 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 FCHO2Q0JRZ9 810 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 TRIM29Q14134 588 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-206ENST00000477546 INF2Q27J81 1249 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 PDZD4Q76G19 769 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-206ENST00000477546 C11orf74Q86VG3 221 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 YAF2Q8IY57 180 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 ZSCAN18Q8TBC5 510 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-206ENST00000477546 ADAMTS14Q8WXS8 1223 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 RABGGTAQ92696 567 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
TRAIP-206ENST00000477546 GIT1Q9Y2X7 761 aa11.51□□□□□ -0.57
TRAIP-206ENST00000477546 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
TRAIP-206ENST00000477546 USP9XQ93008 2570 aaPredicted RBP11.5□□□□□ -0.57
TRAIP-206ENST00000477546 TDP2O95551 362 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 LRG1P02750 347 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 FDPSP14324 419 aaKnown RBP11.5□□□□□ -0.57
TRAIP-206ENST00000477546 KRT2P35908 639 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 MAPK8P45983 427 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 USP11P51784 963 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 FAM193AP78312 1265 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 GRIK3Q13003 919 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 HNRNPDQ14103 355 aaKnown RBP11.5□□□□□ -0.57
TRAIP-206ENST00000477546 PIK3AP1Q6ZUJ8 805 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 KSR1Q8IVT5 923 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 GSTCDQ8NEC7 633 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 OXER1Q8TDS5 423 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 LENG9Q96B70 501 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 ZSCAN31Q96LW9 406 aaPredicted RBP11.5□□□□□ -0.57
TRAIP-206ENST00000477546 HHIPQ96QV1 700 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 CEP89Q96ST8 783 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 NUSAP1Q9BXS6 441 aaKnown RBP11.5□□□□□ -0.57
TRAIP-206ENST00000477546 MTRRQ9UBK8 725 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 GTF3C3Q9Y5Q9 886 aa11.5□□□□□ -0.57
TRAIP-206ENST00000477546 CFAP46Q8IYW2 2715 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 CAPN8A6NHC0 703 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 MSH4O15457 936 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 MAP3K13O43283 966 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 CHMP2AO43633 222 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 GAS7O60861 476 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 SRSF1Q07955 248 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRAIP-206ENST00000477546 ELAVL2Q12926 359 aaKnown RBP11.49□□□□□ -0.57
TRAIP-206ENST00000477546 MTERF2Q49AM1 385 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 TRIM61Q5EBN2 209 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 CYP4A22Q5TCH4 519 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 LRCH2Q5VUJ6 765 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 SRGAP1Q7Z6B7 1085 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 NEK8Q86SG6 692 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 SCUBE3Q8IX30 993 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 HASPINQ8TF76 798 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 TMEM209Q96SK2 561 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
TRAIP-206ENST00000477546 EIF2AQ9BY44 585 aaKnown RBP11.49□□□□□ -0.57
TRAIP-206ENST00000477546 EBF1Q9UH73 591 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 DDX25Q9UHL0 483 aaKnown RBP11.49□□□□□ -0.57
TRAIP-206ENST00000477546 HES2Q9Y543 173 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
TRAIP-206ENST00000477546 EML5Q05BV3 1969 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 EDIL3O43854 480 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 KIF4AO95239 1232 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 APBB3O95704 486 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 ENGP17813 658 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 ABCG1P45844 678 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
TRAIP-206ENST00000477546 NR5A1Q13285 461 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 UGCGQ16739 394 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 Q4G0T1 1027 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 MOXD1Q6UVY6 613 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.48□□□□□ -0.57
TRAIP-206ENST00000477546 HACE1Q8IYU2 909 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 HDDC3Q8N4P3 179 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 GJA10Q969M2 543 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 RSPRY1Q96DX4 576 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 CCDC51Q96ER9 411 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 PAAF1Q9BRP4 392 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 TEKT3Q9BXF9 490 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 NIFKQ9BYG3 293 aaKnown RBP11.48□□□□□ -0.57
TRAIP-206ENST00000477546 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 DISC1Q9NRI5 854 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 GTSE1Q9NYZ3 720 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 CACNG4Q9UBN1 327 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 SEPT9Q9UHD8 586 aaPredicted RBP11.48□□□□□ -0.57
TRAIP-206ENST00000477546 CDY1Q9Y6F8 540 aa11.48□□□□□ -0.57
TRAIP-206ENST00000477546 NUP205Q92621 2012 aa11.47□□□□□ -0.57
TRAIP-206ENST00000477546 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
TRAIP-206ENST00000477546 PRRG1O14668 218 aa11.47□□□□□ -0.57
TRAIP-206ENST00000477546 CAPN9O14815 690 aa11.47□□□□□ -0.57
TRAIP-206ENST00000477546 SLC37A4O43826 429 aa11.47□□□□□ -0.57
TRAIP-206ENST00000477546 CCNT1O60563 726 aaKnown RBP11.47□□□□□ -0.57
TRAIP-206ENST00000477546 MOSPD3O75425 235 aa11.47□□□□□ -0.57
TRAIP-206ENST00000477546 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
TRAIP-206ENST00000477546 GCFC2P16383 781 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms