RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 A0A1W2PQ27 194 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 A0A1W2PQ64 194 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 A0A1W2PQD8 194 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 GOLGA8IPA6NC78 632 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 GOLGA8JA6NMD2 632 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 LOC730098B7Z3J9 87 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 EIF3DO15371 548 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRKD3-209ENST00000477132 TGFB1I1O43294 461 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 RFPL2O75678 378 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 CYP3A5P20815 502 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 GARTP22102 1010 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 SP100P23497 879 aaPredicted RBP13.32□□□□□ -0.28
PRKD3-209ENST00000477132 MCM4P33991 863 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 SYKP43405 635 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 NUCB2P80303 420 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 ITIH3Q06033 890 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 POSTNQ15063 836 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
PRKD3-209ENST00000477132 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 FSIP1Q8NA03 581 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 ZNF507Q8TCN5 953 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 RPGRIP1Q96KN7 1286 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 SUSD3Q96L08 255 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
PRKD3-209ENST00000477132 PCIF1Q9H4Z3 704 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 EPHX3Q9H6B9 360 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 TMEM206Q9H813 350 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 SLC39A2Q9NP94 309 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 FBXW11Q9UKB1 542 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 NUB1Q9Y5A7 615 aa13.32□□□□□ -0.28
PRKD3-209ENST00000477132 NOTCH4Q99466 2003 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 PVALEFA0A1B0GWK0 134 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 SPTLC1O15269 473 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
PRKD3-209ENST00000477132 TRAPPC3O43617 180 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 OR1D2P34982 312 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 AARSP49588 968 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRKD3-209ENST00000477132 CREMQ03060 361 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 MRPL58Q14197 206 aaKnown RBP13.31□□□□□ -0.28
PRKD3-209ENST00000477132 TMEM132DQ14C87 1099 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 KMT5BQ4FZB7 885 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 CES5AQ6NT32 575 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 ARMCX5Q6P1M9 558 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 GPR149Q86SP6 731 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 BRSK2Q8IWQ3 736 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 CD302Q8IX05 232 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 NELFCDQ8IXH7 590 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 KIAA0895Q8NCT3 520 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 ZNF707Q96C28 371 aaPredicted RBP13.31□□□□□ -0.28
PRKD3-209ENST00000477132 POP1Q99575 1024 aaKnown RBP13.31□□□□□ -0.28
PRKD3-209ENST00000477132 ASB7Q9H672 318 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 CDY1Q9Y6F8 540 aa13.31□□□□□ -0.28
PRKD3-209ENST00000477132 DOCK8Q8NF50 2099 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 ANO9A1A5B4 782 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 M0QZQ0 153 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 SYN3O14994 580 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 EXTL3O43909 919 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 TBC1D4O60343 1298 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 PAPLNO95428 1278 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 MTHFRP42898 656 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 POU5F1Q01860 360 aaKnown RBP13.3□□□□□ -0.28
PRKD3-209ENST00000477132 STK4Q13043 487 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 RAB33AQ14088 237 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 C9orf57Q5W0N0 161 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 PDXDC1Q6P996 788 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 ANKS3Q6ZW76 656 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 STXBP4Q6ZWJ1 553 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 BEST2Q8NFU1 509 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 CMASQ8NFW8 434 aaPredicted RBP13.3□□□□□ -0.28
PRKD3-209ENST00000477132 NECTIN4Q96NY8 510 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 TSPAN18Q96SJ8 248 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 RBAKQ9NYW8 714 aaPredicted RBP13.3□□□□□ -0.28
PRKD3-209ENST00000477132 USP25Q9UHP3 1055 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 DERAQ9Y315 318 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 C2CD2Q9Y426 696 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 TIMM13Q9Y5L4 95 aaPredicted RBP13.3□□□□□ -0.28
PRKD3-209ENST00000477132 BACE2Q9Y5Z0 518 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 UBE4BO95155 1302 aa13.3□□□□□ -0.28
PRKD3-209ENST00000477132 WDR27A2RRH5 827 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 C2CD4DB7Z1M9 353 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 PIRO00625 290 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 XPOTO43592 962 aaKnown RBP13.29□□□□□ -0.28
PRKD3-209ENST00000477132 C1RP00736 705 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 ROR1Q01973 937 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 ATAT1Q5SQI0 421 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 SLC8B1Q6J4K2 584 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 KRBA2Q6ZNG9 492 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 C15orf39Q6ZRI6 1047 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 CBWD2Q8IUF1 395 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 GPD1LQ8N335 351 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
PRKD3-209ENST00000477132 HDAC7Q8WUI4 952 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 RIPOR3Q96MK2 946 aa13.29□□□□□ -0.28
PRKD3-209ENST00000477132 PLEKHA4Q9H4M7 779 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms