RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 PANK4Q9NVE7 773 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 STK39Q9UEW8 545 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 ADAM21Q9UKJ8 722 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 RAB21Q9UL25 225 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 TBX20Q9UMR3 447 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 JRKLQ9Y4A0 524 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 SAR1BQ9Y6B6 198 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 UBE4BO95155 1302 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 CEP290O15078 2479 aa4.51□□□□□ -1.69
GAPVD1-216ENST00000474637 FNDC1Q4ZHG4 1894 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MACROD2A1Z1Q3 448 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 C5orf67F2Z3F1 127 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF263O14978 683 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 EPHB6O15197 1021 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 B4GALT5O43286 388 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TOM1L1O75674 476 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MYOGP15173 224 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 CYLC1P35663 651 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PSMD2Q13200 908 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 VWA3BQ502W6 1294 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 HERC4Q5GLZ8 1057 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 NOMO2Q5JPE7 1267 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 SLFN12LQ6IEE8 588 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 FOXR1Q6PIV2 292 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MPZL3Q6UWV2 235 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF720Q7Z2F6 126 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 HDXQ7Z353 690 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TRAPPC11Q7Z392 1133 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 SFR1Q86XK3 245 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM114A1Q8IWE2 563 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM192Q8IY95 271 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 CCDC170Q8IYT3 715 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 RNF169Q8NCN4 708 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 SMG8Q8ND04 991 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 FBXO22Q8NEZ5 403 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 HELQQ8TDG4 1101 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 JAKMIP2Q96AA8 810 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 CAPZA3Q96KX2 299 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 CASD1Q96PB1 797 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 ERGIC2Q96RQ1 377 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TSPAN18Q96SJ8 248 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 HINFPQ9BQA5 517 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 KIFC3Q9BVG8 833 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 LMAN2LQ9H0V9 348 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 NDST4Q9H3R1 872 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PLEKHA4Q9H4M7 779 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM206Q9H813 350 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PDE11AQ9HCR9 933 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM207AQ9NSI2 230 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 RNF19AQ9NV58 838 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 LMCD1Q9NZU5 365 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 IPPQ9Y573 584 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PCDHB12Q9Y5F1 795 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 NLRC5Q86WI3 1866 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 EIF3CLB5ME19 914 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 H3BQF6 201 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 KIAA0391O15091 583 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 ZNF185O15231 689 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 EIF3DO15371 548 aaKnown RBP eCLIP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MAP3K13O43283 966 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 N4BP1O75113 896 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 ERLIN1O75477 346 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 IPO7O95373 1038 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 ATF7P17544 494 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 IBSPP21815 317 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PROZP22891 400 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 CTNNB1P35222 781 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PPM1AP35813 382 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 BMPR1AP36894 532 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PPP1R2P41236 205 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 GRM5P41594 1212 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PSEN1P49768 467 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 LIG4P49917 911 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 YARSP54577 528 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 SNRPFP62306 86 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 POU5F1Q01860 360 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MCL1Q07820 350 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 KIF5AQ12840 1032 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 COASYQ13057 564 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PTPROQ16827 1216 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TTC31Q49AM3 519 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 COBLL1Q53SF7 1204 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 SPOUT1Q5T280 376 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 PAPD7Q5XG87 772 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 LEKR1Q6ZMV7 388 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TAS1R3Q7RTX0 852 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TMCO2Q7Z6W1 182 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MAP4K3Q8IVH8 894 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 GOLGA5Q8TBA6 731 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 FAM193BQ96PV7 902 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 RPS6KC1Q96S38 1066 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 MYCBPQ99417 103 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 EIF3CQ99613 913 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TMEM175Q9BSA9 504 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 C11orf84Q9BUA3 381 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 STRA6Q9BX79 667 aa4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 EIF2AQ9BY44 585 aaKnown RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 TTYH1Q9H313 450 aaPredicted RBP4.5□□□□□ -1.69
GAPVD1-216ENST00000474637 POLD4Q9HCU8 107 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms