RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 CCR3P51677 355 aa22.16■■□□□ 1.14
APP-215ENST00000474136 SIM2Q14190 667 aaPredicted RBP22.16■■□□□ 1.14
APP-215ENST00000474136 SLC8B1Q6J4K2 584 aa22.16■■□□□ 1.14
APP-215ENST00000474136 MCPH1Q8NEM0 835 aa22.16■■□□□ 1.14
APP-215ENST00000474136 KIFC3Q9BVG8 833 aa22.16■■□□□ 1.14
APP-215ENST00000474136 C2orf40Q9H1Z8 148 aa22.16■■□□□ 1.14
APP-215ENST00000474136 MTMR6Q9Y217 621 aa22.16■■□□□ 1.14
APP-215ENST00000474136 NCANO14594 1321 aa22.16■■□□□ 1.14
APP-215ENST00000474136 CHURC1-FNTBB4DL54 471 aa22.15■■□□□ 1.14
APP-215ENST00000474136 HRO43593 1189 aa22.15■■□□□ 1.14
APP-215ENST00000474136 KCNA4P22459 653 aa22.15■■□□□ 1.14
APP-215ENST00000474136 VIPR2P41587 438 aa22.15■■□□□ 1.14
APP-215ENST00000474136 FNTBP49356 437 aa22.15■■□□□ 1.14
APP-215ENST00000474136 SOX4Q06945 474 aaPredicted RBP22.15■■□□□ 1.14
APP-215ENST00000474136 PPP2R5DQ14738 602 aa22.15■■□□□ 1.14
APP-215ENST00000474136 PRR23CQ6ZRP0 262 aa22.15■■□□□ 1.14
APP-215ENST00000474136 HS6ST3Q8IZP7 471 aa22.15■■□□□ 1.14
APP-215ENST00000474136 IRF7Q92985 503 aa22.15■■□□□ 1.14
APP-215ENST00000474136 CYP4F11Q9HBI6 524 aa22.15■■□□□ 1.14
APP-215ENST00000474136 POLD4Q9HCU8 107 aa22.15■■□□□ 1.14
APP-215ENST00000474136 TRAPPC3O43617 180 aa22.14■■□□□ 1.14
APP-215ENST00000474136 MOSPD3O75425 235 aa22.14■■□□□ 1.14
APP-215ENST00000474136 CHRNB1P11230 501 aa22.14■■□□□ 1.14
APP-215ENST00000474136 GJA1P17302 382 aa22.14■■□□□ 1.14
APP-215ENST00000474136 CCNE1P24864 410 aa22.14■■□□□ 1.14
APP-215ENST00000474136 KRT2P35908 639 aa22.14■■□□□ 1.14
APP-215ENST00000474136 CXCL12P48061 93 aa22.14■■□□□ 1.14
APP-215ENST00000474136 PDZD4Q76G19 769 aaPredicted RBP22.14■■□□□ 1.14
APP-215ENST00000474136 DEPTORQ8TB45 409 aa22.14■■□□□ 1.14
APP-215ENST00000474136 IER2Q9BTL4 223 aa22.14■■□□□ 1.14
APP-215ENST00000474136 INSL5Q9Y5Q6 135 aa22.14■■□□□ 1.14
APP-215ENST00000474136 ZNF197O14709 1029 aa22.13■■□□□ 1.13
APP-215ENST00000474136 LRP3O75074 770 aa22.13■■□□□ 1.13
APP-215ENST00000474136 MED24O75448 989 aa22.13■■□□□ 1.13
APP-215ENST00000474136 ATF2P15336 505 aa22.13■■□□□ 1.13
APP-215ENST00000474136 PSMC3P17980 439 aa22.13■■□□□ 1.13
APP-215ENST00000474136 GNL2Q13823 731 aaKnown RBP22.13■■□□□ 1.13
APP-215ENST00000474136 DCAF4L1Q3SXM0 396 aa22.13■■□□□ 1.13
APP-215ENST00000474136 NT5DC1Q5TFE4 455 aa22.13■■□□□ 1.13
APP-215ENST00000474136 CATSPER3Q86XQ3 398 aa22.13■■□□□ 1.13
APP-215ENST00000474136 TCEAL8Q8IYN2 117 aa22.13■■□□□ 1.13
APP-215ENST00000474136 SMARCD2Q92925 531 aa22.13■■□□□ 1.13
APP-215ENST00000474136 UROC1Q96N76 676 aa22.13■■□□□ 1.13
APP-215ENST00000474136 MTMR9Q96QG7 549 aa22.13■■□□□ 1.13
APP-215ENST00000474136 FOXP1Q9H334 677 aaPredicted RBP22.13■■□□□ 1.13
APP-215ENST00000474136 TRPV5Q9NQA5 729 aa22.13■■□□□ 1.13
APP-215ENST00000474136 RBM12Q9NTZ6 932 aaKnown RBP22.13■■□□□ 1.13
APP-215ENST00000474136 COL4A2P08572 1712 aa22.13■■□□□ 1.13
APP-215ENST00000474136 SMIM28A0A1B0GU29 152 aa22.12■■□□□ 1.13
APP-215ENST00000474136 NEMFO60524 1076 aa22.12■■□□□ 1.13
APP-215ENST00000474136 HOXC13P31276 330 aa22.12■■□□□ 1.13
APP-215ENST00000474136 CSRP2Q16527 193 aa22.12■■□□□ 1.13
APP-215ENST00000474136 HEATR6Q6AI08 1181 aaKnown RBP22.12■■□□□ 1.13
APP-215ENST00000474136 BRAPQ7Z569 592 aa22.12■■□□□ 1.13
APP-215ENST00000474136 CEP120Q8N960 986 aa22.12■■□□□ 1.13
APP-215ENST00000474136 TMEM60Q9H2L4 133 aa22.12■■□□□ 1.13
APP-215ENST00000474136 CHD6Q8TD26 2715 aa22.12■■□□□ 1.13
APP-215ENST00000474136 MICAL2O94851 1124 aa22.11■■□□□ 1.13
APP-215ENST00000474136 F13A1P00488 732 aa22.11■■□□□ 1.13
APP-215ENST00000474136 NAMPTP43490 491 aa22.11■■□□□ 1.13
APP-215ENST00000474136 CYP4A22Q5TCH4 519 aa22.11■■□□□ 1.13
APP-215ENST00000474136 ATF7IP2Q5U623 682 aa22.11■■□□□ 1.13
APP-215ENST00000474136 MCTP1Q6DN14 999 aa22.11■■□□□ 1.13
APP-215ENST00000474136 PADI6Q6TGC4 694 aa22.11■■□□□ 1.13
APP-215ENST00000474136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.11■■□□□ 1.13
APP-215ENST00000474136 C2orf42Q9NWW7 574 aa22.11■■□□□ 1.13
APP-215ENST00000474136 CEP72Q9P209 647 aa22.11■■□□□ 1.13
APP-215ENST00000474136 FBXL5Q9UKA1 691 aa22.11■■□□□ 1.13
APP-215ENST00000474136 RALYQ9UKM9 306 aaKnown RBP22.11■■□□□ 1.13
APP-215ENST00000474136 CNOT1A5YKK6 2376 aaKnown RBP22.1■■□□□ 1.13
APP-215ENST00000474136 ARNTLO00327 626 aa22.1■■□□□ 1.13
APP-215ENST00000474136 ZNF263O14978 683 aa22.1■■□□□ 1.13
APP-215ENST00000474136 MYL4P12829 197 aa22.1■■□□□ 1.13
APP-215ENST00000474136 CYP11B2P19099 503 aa22.1■■□□□ 1.13
APP-215ENST00000474136 SOX9P48436 509 aa22.1■■□□□ 1.13
APP-215ENST00000474136 GUCY1B3Q02153 619 aa22.1■■□□□ 1.13
APP-215ENST00000474136 PKP1Q13835 747 aa22.1■■□□□ 1.13
APP-215ENST00000474136 WDR44Q5JSH3 913 aa22.1■■□□□ 1.13
APP-215ENST00000474136 Q6ZS52 159 aa22.1■■□□□ 1.13
APP-215ENST00000474136 SPEM1Q8N4L4 309 aa22.1■■□□□ 1.13
APP-215ENST00000474136 ZSCAN18Q8TBC5 510 aaPredicted RBP22.1■■□□□ 1.13
APP-215ENST00000474136 DEPDC1BQ8WUY9 529 aa22.1■■□□□ 1.13
APP-215ENST00000474136 RSPRY1Q96DX4 576 aa22.1■■□□□ 1.13
APP-215ENST00000474136 TUFT1Q9NNX1 390 aa22.1■■□□□ 1.13
APP-215ENST00000474136 ZDHHC9Q9Y397 364 aa22.1■■□□□ 1.13
APP-215ENST00000474136 HEPACAM2A8MVW5 462 aa22.09■■□□□ 1.13
APP-215ENST00000474136 K7ESF4 209 aa22.09■■□□□ 1.13
APP-215ENST00000474136 PODXLO00592 558 aa22.09■■□□□ 1.13
APP-215ENST00000474136 U2AF2P26368 475 aaKnown RBP eCLIP22.09■■□□□ 1.13
APP-215ENST00000474136 FOSBP53539 338 aa22.09■■□□□ 1.13
APP-215ENST00000474136 OSTNP61366 133 aa22.09■■□□□ 1.13
APP-215ENST00000474136 TWF1Q12792 350 aa22.09■■□□□ 1.13
APP-215ENST00000474136 PTGDRQ13258 359 aa22.09■■□□□ 1.13
APP-215ENST00000474136 MRPL58Q14197 206 aaKnown RBP22.09■■□□□ 1.13
APP-215ENST00000474136 TEAD2Q15562 447 aa22.09■■□□□ 1.13
APP-215ENST00000474136 MFSD6LQ8IWD5 586 aa22.09■■□□□ 1.13
APP-215ENST00000474136 DIS3L2Q8IYB7 885 aaKnown RBP22.09■■□□□ 1.13
APP-215ENST00000474136 ZMAT2Q96NC0 199 aaKnown RBP22.09■■□□□ 1.13
APP-215ENST00000474136 NACC1Q96RE7 527 aa22.09■■□□□ 1.13
APP-215ENST00000474136 TICRRQ7Z2Z1 1910 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms