RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GIT1Q9Y2X7 761 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 TNKSO95271 1327 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 MGAMO43451 1857 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 PLXNA1Q9UIW2 1896 aa2.88□□□□□ -1.95
CALD1-216ENST00000473714 ZNF462Q96JM2 2506 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CACNA1HO95180 2353 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 KRIT1O00522 736 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 SCDO00767 359 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 KCNK3O14649 394 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 DCXO43602 365 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 B4GALT3O60512 393 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 MAFKO60675 156 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 RAD17O75943 681 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CAMTA2O94983 1202 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 FUCA1P04066 466 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CYP2C8P10632 490 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 COL6A2P12110 1019 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 SLC9A1P19634 815 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 MCM7P33993 719 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 THBS2P35442 1172 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 KIF11P52732 1056 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 INHBCP55103 352 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 IRF9Q00978 393 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 DSG1Q02413 1049 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 TMEM132BQ14DG7 1078 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 PCBP2Q15366 365 aaKnown RBP eCLIP2.87□□□□□ -1.95
CALD1-216ENST00000473714 ZRSR2Q15696 482 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 GPR19Q15760 415 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 INF2Q27J81 1249 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 HS1BP3Q53T59 392 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 RRP12Q5JTH9 1297 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 IFIT1BQ5T764 474 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 LRCH2Q5VUJ6 765 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 PRAMEF18Q5VWM3 479 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CXorf57Q6NSI4 855 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 FRMD7Q6ZUT3 714 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 OVCH1Q7RTY7 1134 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ARMC9Q7Z3E5 817 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 BMP8AQ7Z5Y6 402 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CABP7Q86V35 215 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 PTRH1Q86Y79 214 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 CCDC103Q8IW40 242 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.87□□□□□ -1.95
CALD1-216ENST00000473714 SMC5Q8IY18 1101 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 TCEAL8Q8IYN2 117 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 NLGN4XQ8N0W4 816 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 MIER2Q8N344 545 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 EFHBQ8N7U6 833 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 MAGEB6Q8N7X4 407 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 KIAA1958Q8N8K9 716 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CNBD1Q8NA66 436 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 HERVK_113Q902F9 699 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ATOH1Q92858 354 aaPredicted RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 VOPP1Q96AW1 172 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 HSPBAP1Q96EW2 488 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 CSRNP2Q9H175 543 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 PRDM12Q9H4Q4 367 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ARNT2Q9HBZ2 717 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ALG13Q9NP73 1137 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 DLL3Q9NYJ7 618 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 H2AFY2Q9P0M6 372 aaPredicted RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 USP25Q9UHP3 1055 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ZBTB21Q9ULJ3 1066 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ZFR2Q9UPR6 939 aaKnown RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 NPFFR2Q9Y5X5 522 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 COL1A1P02452 1464 aaPredicted RBP2.87□□□□□ -1.95
CALD1-216ENST00000473714 COL4A6Q14031 1691 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 MYO15AQ9UKN7 3530 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 ADGRA2Q96PE1 1338 aa2.87□□□□□ -1.95
CALD1-216ENST00000473714 DOCK3Q8IZD9 2030 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 RIC1Q4ADV7 1423 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 DNAH12Q6ZR08 3092 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 C7orf72A4D263 438 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 C9orf118A6NHY6 69 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 HMGB1P1B2RPK0 211 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 PATE3B3GLJ2 98 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 ERVV-2B6SEH9 535 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 C22orf46C9J442 243 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 H7BY64 318 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 DDX3XO00571 662 aaKnown RBP eCLIP2.86□□□□□ -1.95
CALD1-216ENST00000473714 NPHP1O15259 732 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 FGF10O15520 208 aaPredicted RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 KDM1AO60341 852 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 TLR2O60603 784 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 RFPL1O75677 317 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 APOL3O95236 402 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 LDHAP00338 332 aaKnown RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 LTFP02788 710 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 CKMP06732 381 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 RPS12P25398 132 aaKnown RBP2.86□□□□□ -1.95
CALD1-216ENST00000473714 CD40P25942 277 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 CTGFP29279 349 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 NF2P35240 595 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 NBL1P41271 181 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 JAM2P57087 298 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 CORO7P57737 925 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 PPP2CBP62714 309 aa2.86□□□□□ -1.95
CALD1-216ENST00000473714 PPP2CAP67775 309 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms