RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PPP2R3CQ969Q6 453 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 RAD9AQ99638 391 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 TRPV6Q9H1D0 765 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 WNT8AQ9H1J5 351 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 KCNH6Q9H252 994 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 ZNF552Q9H707 407 aaPredicted RBP4.06□□□□□ -1.76
XRN1-209ENST00000472625 MAP3K20Q9NYL2 800 aaKnown RBP4.06□□□□□ -1.76
XRN1-209ENST00000472625 TNFRSF10DQ9UBN6 386 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.06□□□□□ -1.76
XRN1-209ENST00000472625 RWDD3Q9Y3V2 267 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 SLC12A7Q9Y666 1083 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 PARP14Q460N5 1801 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 TRANK1O15050 2925 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 LRRC37A2A6NM11 1700 aa4.06□□□□□ -1.76
XRN1-209ENST00000472625 PLXNA1Q9UIW2 1896 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 ASTN1O14525 1302 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 GRXCR1A8MXD5 290 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 M0R2C6 588 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 EIF3JO75822 258 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 STAM2O75886 525 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 GJB5O95377 273 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 AMHP03971 560 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 IQCF3P0C7M6 154 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 TGFB3P10600 412 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 PDHBP11177 359 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 GNAT1P11488 350 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 ITGA4P13612 1032 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 PI3P19957 117 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 CALML3P27482 149 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 RPS6P62753 249 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 ZNF543Q08ER8 600 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 BAATQ14032 418 aaPredicted RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 PPP2R5EQ16537 467 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 PTGISQ16647 500 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 MCMDC2Q4G0Z9 681 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 LILRA6Q6PI73 481 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 TTLL10Q6ZVT0 673 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 LRRC8DQ7L1W4 858 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 EEPD1Q7L9B9 569 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 DEFB128Q7Z7B8 93 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 DGKHQ86XP1 1220 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 SPPL2CQ8IUH8 684 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 FAM178BQ8IXR5 827 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 PPTC7Q8NI37 304 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 ARNTL2Q8WYA1 636 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 APBB2Q92870 758 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 TNPO1Q92973 898 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 SCLYQ96I15 445 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 TGS1Q96RS0 853 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 UBAC1Q9BSL1 405 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 KAT14Q9H8E8 782 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 TNFRSF12AQ9NP84 129 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 TRMT13Q9NUP7 481 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 ZNF215Q9UL58 517 aaPredicted RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 CNOT6Q9ULM6 557 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 MRPL11Q9Y3B7 192 aaKnown RBP4.05□□□□□ -1.76
XRN1-209ENST00000472625 INSL6Q9Y581 213 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 MTCH2Q9Y6C9 303 aa4.05□□□□□ -1.76
XRN1-209ENST00000472625 COL4A6Q14031 1691 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 GRIN2DO15399 1336 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 UMODL1Q5DID0 1318 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 BDP1A6H8Y1 2624 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 MYH7P12883 1935 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 ANKRD34BA5PLL1 514 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 OR14I1A6ND48 311 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 NOP56O00567 594 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 ZNF213O14771 459 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 DHX16O60231 1041 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 SMARCA5O60264 1052 aaPredicted RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 GJB6O95452 261 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 F2P00734 622 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 CXCL10P02778 98 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 MMP3P08254 477 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 GSTM1P09488 218 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 SNHG28P0DPA3 235 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 HSPD1P10809 573 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 CYP2C9P11712 490 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 DNAJA1P31689 397 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 RABGGTBP53611 331 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 ERVFRD-1P60508 538 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 WDR5P61964 334 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 PSMC6P62333 389 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 YBX1P67809 324 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 SRSF3P84103 164 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 TAP1Q03518 808 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 ARID5AQ03989 594 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 GRB10Q13322 594 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 PPP2R5DQ14738 602 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 SART3Q15020 963 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 CDC37Q16543 378 aaPredicted RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 IMMTQ16891 758 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 MUM1L1Q5H9M0 696 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 RRP12Q5JTH9 1297 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 ARHGEF16Q5VV41 709 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 HEATR6Q6AI08 1181 aaKnown RBP4.04□□□□□ -1.76
XRN1-209ENST00000472625 DENND5AQ6IQ26 1287 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 SLC30A10Q6XR72 485 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 TEX2Q8IWB9 1127 aa4.04□□□□□ -1.76
XRN1-209ENST00000472625 DHX37Q8IY37 1157 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms