RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 CEP72Q9P209 647 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 ZMIZ1Q9ULJ6 1067 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 PCDHA12Q9UN75 941 aa20.92■□□□□ 0.94
SORT1-203ENST00000471996 MYBPHLA2RUH7 354 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 SLC38A8A6NNN8 435 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 MYL4P12829 197 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 RAP1GAPP47736 663 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 FCHO2Q0JRZ9 810 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 TOB2Q14106 344 aaPredicted RBP20.91■□□□□ 0.94
SORT1-203ENST00000471996 DCAF4L1Q3SXM0 396 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 TXNDC11Q6PKC3 985 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 UNQ6494/PRO21346Q6UXR6 183 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 TICRRQ7Z2Z1 1910 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 CACNA2D4Q7Z3S7 1137 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 RSPRY1Q96DX4 576 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 CCDC113Q9H0I3 377 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 ASAH2Q9NR71 780 aa20.91■□□□□ 0.94
SORT1-203ENST00000471996 DAXXQ9UER7 740 aaPredicted RBP20.91■□□□□ 0.94
SORT1-203ENST00000471996 RALGAPA1Q6GYQ0 2036 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 C1QTNF9BB2RNN3 333 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 SPECC1L-ADORA2AF8WAN1 911 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 H7C4K7 107 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 SYN3O14994 580 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 CDC45O75419 566 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 EDN1P05305 212 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 C1QTNF9P0C862 333 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 TWF1Q12792 350 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 MRPL58Q14197 206 aaKnown RBP20.9■□□□□ 0.94
SORT1-203ENST00000471996 ACAP1Q15027 740 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 TEAD2Q15562 447 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 EARS2Q5JPH6 523 aaKnown RBP20.9■□□□□ 0.94
SORT1-203ENST00000471996 PLA2G2CQ5R387 149 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 CPLX2Q6PUV4 134 aaKnown RBP20.9■□□□□ 0.94
SORT1-203ENST00000471996 RALGPS2Q86X27 583 aaPredicted RBP20.9■□□□□ 0.94
SORT1-203ENST00000471996 SYNPOQ8N3V7 929 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 OXER1Q8TDS5 423 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 GAB3Q8WWW8 586 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 ZNF274Q96GC6 653 aaPredicted RBP20.9■□□□□ 0.94
SORT1-203ENST00000471996 FBXL5Q9UKA1 691 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 CEP295Q9C0D2 2601 aa20.9■□□□□ 0.94
SORT1-203ENST00000471996 SMIM28A0A1B0GU29 152 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 LIG1P18858 919 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 CTHP32929 405 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 SOX4Q06945 474 aaPredicted RBP20.89■□□□□ 0.93
SORT1-203ENST00000471996 CCINQ13939 588 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 KDF1Q8NAX2 398 aaPredicted RBP20.89■□□□□ 0.93
SORT1-203ENST00000471996 SHKBP1Q8TBC3 707 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 BSNDQ8WZ55 320 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 SLITRK6Q9H5Y7 841 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 AFF4Q9UHB7 1163 aaKnown RBP20.89■□□□□ 0.93
SORT1-203ENST00000471996 MAFFQ9ULX9 164 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 PCDHGA5Q9Y5G8 931 aa20.89■□□□□ 0.93
SORT1-203ENST00000471996 RPP40O75818 363 aaKnown RBP20.88■□□□□ 0.93
SORT1-203ENST00000471996 ATP2B1P20020 1258 aa20.88■□□□□ 0.93
SORT1-203ENST00000471996 PSAPL1Q6NUJ1 521 aa20.88■□□□□ 0.93
SORT1-203ENST00000471996 KBTBD6Q86V97 674 aa20.88■□□□□ 0.93
SORT1-203ENST00000471996 FAM200AQ8TCP9 573 aa20.88■□□□□ 0.93
SORT1-203ENST00000471996 TTC12Q9H892 705 aaPredicted RBP20.88■□□□□ 0.93
SORT1-203ENST00000471996 SPEGQ15772 3267 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 CCDC163A0A0D9SF12 145 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 PODXLO00592 558 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 XBP1P17861 261 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 PON2Q15165 354 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 CALCRLQ16602 461 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 CTXN3Q4LDR2 81 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 XKR4Q5GH76 650 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 RUFY3Q7L099 469 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 DEPTORQ8TB45 409 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 GJB4Q9NTQ9 266 aa20.87■□□□□ 0.93
SORT1-203ENST00000471996 GREB1Q4ZG55 1949 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 FAM205CA6NFA0 338 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 EXTL3O43909 919 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 NAMPTP43490 491 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 NT5DC1Q5TFE4 455 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 ATF7IP2Q5U623 682 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 RNF43Q68DV7 783 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 ALKAL1Q6UXT8 129 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 TTC8Q8TAM2 541 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 SMOC1Q9H4F8 434 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 VPS45Q9NRW7 570 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 SLC38A7Q9NVC3 462 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 GTSE1Q9NYZ3 720 aa20.86■□□□□ 0.93
SORT1-203ENST00000471996 SPATA31C1P0DKV0 1188 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 CCDC192P0DO97 292 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 MPLP40238 635 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 PXNP49023 591 aaPredicted RBP20.85■□□□□ 0.93
SORT1-203ENST00000471996 STK3Q13188 491 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 ZNF280DQ6N043 979 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 APBB1IPQ7Z5R6 666 aaPredicted RBP20.85■□□□□ 0.93
SORT1-203ENST00000471996 ZC3H10Q96K80 434 aaKnown RBP20.85■□□□□ 0.93
SORT1-203ENST00000471996 LRRC3BQ96PB8 259 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 LARP6Q9BRS8 491 aaKnown RBP20.85■□□□□ 0.93
SORT1-203ENST00000471996 LRRC3Q9BY71 257 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 NUB1Q9Y5A7 615 aa20.85■□□□□ 0.93
SORT1-203ENST00000471996 ZZEF1O43149 2961 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 A0A1W2PRU2 124 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 AKAP3O75969 853 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 TXKP42681 527 aa20.84■□□□□ 0.93
SORT1-203ENST00000471996 NOVA1P51513 510 aaKnown RBP20.84■□□□□ 0.93
SORT1-203ENST00000471996 YARSP54577 528 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms