RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 GFRA3O60609 400 aa8.82□□□□□ -1
USP48-207ENST00000471752 TOM1L1O75674 476 aa8.82□□□□□ -1
USP48-207ENST00000471752 CENPBP07199 599 aaPredicted RBP8.82□□□□□ -1
USP48-207ENST00000471752 RHOP08100 348 aa8.82□□□□□ -1
USP48-207ENST00000471752 ADSSP30520 456 aa8.82□□□□□ -1
USP48-207ENST00000471752 TIE1P35590 1138 aa8.82□□□□□ -1
USP48-207ENST00000471752 CUL4AQ13619 759 aa8.82□□□□□ -1
USP48-207ENST00000471752 NOLC1Q14978 699 aaKnown RBP eCLIP8.82□□□□□ -1
USP48-207ENST00000471752 ANGPT1Q15389 498 aa8.82□□□□□ -1
USP48-207ENST00000471752 SLC8B1Q6J4K2 584 aa8.82□□□□□ -1
USP48-207ENST00000471752 CCDC105Q8IYK2 499 aa8.82□□□□□ -1
USP48-207ENST00000471752 MAML2Q8IZL2 1156 aaPredicted RBP8.82□□□□□ -1
USP48-207ENST00000471752 MYCT1Q8N699 235 aa8.82□□□□□ -1
USP48-207ENST00000471752 TTC9BQ8N6N2 239 aa8.82□□□□□ -1
USP48-207ENST00000471752 ZNF461Q8TAF7 563 aa8.82□□□□□ -1
USP48-207ENST00000471752 RAD54LQ92698 747 aa8.82□□□□□ -1
USP48-207ENST00000471752 DRC1Q96MC2 740 aa8.82□□□□□ -1
USP48-207ENST00000471752 CORO1BQ9BR76 489 aa8.82□□□□□ -1
USP48-207ENST00000471752 PLSCR2Q9NRY7 297 aa8.82□□□□□ -1
USP48-207ENST00000471752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.82□□□□□ -1
USP48-207ENST00000471752 TBC1D7Q9P0N9 293 aa8.82□□□□□ -1
USP48-207ENST00000471752 WNT16Q9UBV4 365 aa8.82□□□□□ -1
USP48-207ENST00000471752 TBX20Q9UMR3 447 aa8.82□□□□□ -1
USP48-207ENST00000471752 SLC27A5Q9Y2P5 690 aa8.82□□□□□ -1
USP48-207ENST00000471752 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
USP48-207ENST00000471752 R4GN57 208 aa8.82□□□□□ -1
USP48-207ENST00000471752 F5P12259 2224 aa8.82□□□□□ -1
USP48-207ENST00000471752 SPTBN2O15020 2390 aa8.81□□□□□ -1
USP48-207ENST00000471752 VPS37CA5D8V6 355 aaPredicted RBP8.81□□□□□ -1
USP48-207ENST00000471752 PRR23AA6NEV1 266 aa8.81□□□□□ -1
USP48-207ENST00000471752 MYMKA6NI61 221 aa8.81□□□□□ -1
USP48-207ENST00000471752 CLDN3O15551 220 aa8.81□□□□□ -1
USP48-207ENST00000471752 C1RP00736 705 aa8.81□□□□□ -1
USP48-207ENST00000471752 HNRNPA1P09651 372 aaKnown RBP eCLIP8.81□□□□□ -1
USP48-207ENST00000471752 SRFP11831 508 aa8.81□□□□□ -1
USP48-207ENST00000471752 FCARP24071 287 aa8.81□□□□□ -1
USP48-207ENST00000471752 NBL1P41271 181 aa8.81□□□□□ -1
USP48-207ENST00000471752 VIPR2P41587 438 aa8.81□□□□□ -1
USP48-207ENST00000471752 ACOT2P49753 483 aa8.81□□□□□ -1
USP48-207ENST00000471752 ZNF131P52739 623 aa8.81□□□□□ -1
USP48-207ENST00000471752 YARSP54577 528 aaKnown RBP8.81□□□□□ -1
USP48-207ENST00000471752 ADCY1Q08828 1119 aa8.81□□□□□ -1
USP48-207ENST00000471752 RESTQ13127 1097 aa8.81□□□□□ -1
USP48-207ENST00000471752 FZD5Q13467 585 aa8.81□□□□□ -1
USP48-207ENST00000471752 CTXN3Q4LDR2 81 aa8.81□□□□□ -1
USP48-207ENST00000471752 PABPC1LQ4VXU2 614 aaKnown RBP8.81□□□□□ -1
USP48-207ENST00000471752 SLC44A4Q53GD3 710 aa8.81□□□□□ -1
USP48-207ENST00000471752 FAM78AQ5JUQ0 283 aa8.81□□□□□ -1
USP48-207ENST00000471752 PRSS36Q5K4E3 855 aa8.81□□□□□ -1
USP48-207ENST00000471752 STXBP5Q5T5C0 1151 aa8.81□□□□□ -1
USP48-207ENST00000471752 LIN9Q5TKA1 542 aa8.81□□□□□ -1
USP48-207ENST00000471752 ARL6IP4Q66PJ3 421 aaKnown RBP8.81□□□□□ -1
USP48-207ENST00000471752 JADE1Q6IE81 842 aa8.81□□□□□ -1
USP48-207ENST00000471752 CRELD2Q6UXH1 353 aaPredicted RBP8.81□□□□□ -1
USP48-207ENST00000471752 CYP26C1Q6V0L0 522 aa8.81□□□□□ -1
USP48-207ENST00000471752 DYMQ7RTS9 669 aa8.81□□□□□ -1
USP48-207ENST00000471752 GLIS3Q8NEA6 775 aa8.81□□□□□ -1
USP48-207ENST00000471752 DDX12PQ92771 950 aa8.81□□□□□ -1
USP48-207ENST00000471752 STAMQ92783 540 aa8.81□□□□□ -1
USP48-207ENST00000471752 FAM212AQ96EL1 285 aa8.81□□□□□ -1
USP48-207ENST00000471752 SUSD3Q96L08 255 aa8.81□□□□□ -1
USP48-207ENST00000471752 LRRC3BQ96PB8 259 aa8.81□□□□□ -1
USP48-207ENST00000471752 PGLYRP2Q96PD5 576 aa8.81□□□□□ -1
USP48-207ENST00000471752 LRRC3Q9BY71 257 aa8.81□□□□□ -1
USP48-207ENST00000471752 RAB34Q9BZG1 259 aa8.81□□□□□ -1
USP48-207ENST00000471752 ZHX3Q9H4I2 956 aa8.81□□□□□ -1
USP48-207ENST00000471752 CYP4F11Q9HBI6 524 aa8.81□□□□□ -1
USP48-207ENST00000471752 FBXO2Q9UK22 296 aaPredicted RBP8.81□□□□□ -1
USP48-207ENST00000471752 MRPS23Q9Y3D9 190 aaKnown RBP8.81□□□□□ -1
USP48-207ENST00000471752 OTOGLQ3ZCN5 2332 aa8.81□□□□□ -1
USP48-207ENST00000471752 MTCL1Q9Y4B5 1905 aaKnown RBP8.8□□□□□ -1
USP48-207ENST00000471752 CACNA1AO00555 2505 aa8.8□□□□□ -1
USP48-207ENST00000471752 A0A0B4J269 797 aa8.8□□□□□ -1
USP48-207ENST00000471752 ARHGEF37A1IGU5 675 aa8.8□□□□□ -1
USP48-207ENST00000471752 M0QZQ0 153 aa8.8□□□□□ -1
USP48-207ENST00000471752 EIF5BO60841 1220 aaKnown RBP8.8□□□□□ -1
USP48-207ENST00000471752 ADRB2P07550 413 aa8.8□□□□□ -1
USP48-207ENST00000471752 NFICP08651 508 aa8.8□□□□□ -1
USP48-207ENST00000471752 CLTAP09496 248 aa8.8□□□□□ -1
USP48-207ENST00000471752 ATF2P15336 505 aa8.8□□□□□ -1
USP48-207ENST00000471752 SYT1P21579 422 aa8.8□□□□□ -1
USP48-207ENST00000471752 RPL9P32969 192 aaKnown RBP8.8□□□□□ -1
USP48-207ENST00000471752 MCM4P33991 863 aa8.8□□□□□ -1
USP48-207ENST00000471752 DDIT3P35638 169 aa8.8□□□□□ -1
USP48-207ENST00000471752 UBA7P41226 1012 aa8.8□□□□□ -1
USP48-207ENST00000471752 MATR3P43243 847 aaKnown RBP eCLIP8.8□□□□□ -1
USP48-207ENST00000471752 CASP5P51878 434 aa8.8□□□□□ -1
USP48-207ENST00000471752 SMTNP53814 917 aa8.8□□□□□ -1
USP48-207ENST00000471752 ELAVL2Q12926 359 aaKnown RBP8.8□□□□□ -1
USP48-207ENST00000471752 STRN3Q13033 797 aa8.8□□□□□ -1
USP48-207ENST00000471752 GRM2Q14416 872 aa8.8□□□□□ -1
USP48-207ENST00000471752 CCDC142Q17RM4 750 aa8.8□□□□□ -1
USP48-207ENST00000471752 UVSSAQ2YD98 709 aa8.8□□□□□ -1
USP48-207ENST00000471752 WDR44Q5JSH3 913 aa8.8□□□□□ -1
USP48-207ENST00000471752 ZPBP2Q6X784 338 aa8.8□□□□□ -1
USP48-207ENST00000471752 ANKS3Q6ZW76 656 aa8.8□□□□□ -1
USP48-207ENST00000471752 LRRTM3Q86VH5 581 aa8.8□□□□□ -1
USP48-207ENST00000471752 TCEAL8Q8IYN2 117 aa8.8□□□□□ -1
USP48-207ENST00000471752 ATAD1Q8NBU5 361 aa8.8□□□□□ -1
USP48-207ENST00000471752 STKLD1Q8NE28 680 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms