RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 CHST8Q9H2A9 424 aa6.9□□□□□ -1.3
NF1-208ENST00000471572 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
NF1-208ENST00000471572 TBC1D23Q9NUY8 699 aa6.9□□□□□ -1.3
NF1-208ENST00000471572 AJAP1Q9UKB5 411 aaPredicted RBP6.9□□□□□ -1.3
NF1-208ENST00000471572 NUB1Q9Y5A7 615 aa6.9□□□□□ -1.3
NF1-208ENST00000471572 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.9□□□□□ -1.3
NF1-208ENST00000471572 A0A0A6YYJ9 748 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 A0A0A6YYK5 440 aaPredicted RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 FAM95CA0A1B0GW59 222 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 TMEM233B4DJY2 109 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 ABHD16AO95870 558 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 AMY1AP04745 511 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 CSF1P09603 554 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 GLB1P16278 677 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 PORP16435 677 aaPredicted RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 ENDOUP21128 410 aaKnown RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 CUL4AQ13619 759 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SNX30Q5VWJ9 437 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 LRSAM1Q6UWE0 723 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 ARRDC4Q8NCT1 418 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 OR6B3Q8NGW1 331 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SOX7Q9BT81 388 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 EIF2AQ9BY44 585 aaKnown RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 WDCPQ9H6R7 721 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 HERC5Q9UII4 1024 aaKnown RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 MED16Q9Y2X0 877 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SIT1Q9Y3P8 196 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 TCRBV5S2A0A599 114 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 GNAT3A8MTJ3 354 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 ACTL6BO94805 426 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 MSL3P1P0C860 447 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 RXRAP19793 462 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 FUT4P22083 530 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 CCR9P51686 369 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SRSF11Q05519 484 aaKnown RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 MGAT5Q09328 741 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 DBPQ10586 325 aaPredicted RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 CDC16Q13042 620 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 RPUSD3Q6P087 351 aaKnown RBP6.89□□□□□ -1.31
NF1-208ENST00000471572 FAM47EQ6ZV65 393 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 ZNF765Q7L2R6 523 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SLCO6A1Q86UG4 719 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 OR56A3Q8NH54 315 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 PHOSPHO1Q8TCT1 267 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 CCHCR1Q8TD31 782 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 ZNF384Q8TF68 577 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 UBE2FQ969M7 185 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SNX21Q969T3 373 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 SH3KBP1Q96B97 665 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 TIGD1Q96MW7 591 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 FTSJ1Q9UET6 329 aa6.89□□□□□ -1.31
NF1-208ENST00000471572 FADS2P1A8MWK0 482 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 F2RL2O00254 374 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 AKR1B10O60218 316 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 TK1P04183 234 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 HSP90AB1P08238 724 aaKnown RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 BMP3P12645 472 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 MUTP22033 750 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 ABCD3P28288 659 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 ADSLP30566 484 aaPredicted RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 WASHC5Q12768 1159 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 PPP2R5CQ13362 524 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 CTBP1Q13363 440 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 RAB39AQ14964 217 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 TARBP2Q15633 366 aaKnown RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 TMTC4Q5T4D3 741 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 BBS12Q6ZW61 710 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 GLB1L2Q8IW92 636 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 KCNG4Q8TDN1 519 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 HHIPL1Q96JK4 782 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 HSPA12BQ96MM6 686 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 MAGEB5Q9BZ81 275 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 TWSG1Q9GZX9 223 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 TAF1DQ9H5J8 278 aaPredicted RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 CALCOCO1Q9P1Z2 691 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 CFDP1Q9UEE9 299 aaPredicted RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 PCDHB4Q9Y5E5 795 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 H7C0S8 307 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 TMEM63AO94886 807 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 MATN4O95460 622 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 HSPA4LO95757 839 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 CLTBP09497 229 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 ADMP35318 185 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 SLC6A11P48066 632 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 SESN2P58004 480 aaPredicted RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 KRT76Q01546 638 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 NFKBIBQ15653 356 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 TBC1D10BQ4KMP7 808 aaPredicted RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 GJC2Q5T442 439 aaPredicted RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 RSPH3Q86UC2 560 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 VSIG1Q86XK7 387 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 SHISA5Q8N114 240 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 G6PC3Q9BUM1 346 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 KIAA1683Q9H0B3 1180 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 AKTIPQ9H8T0 292 aa6.88□□□□□ -1.31
NF1-208ENST00000471572 SEPSECSQ9HD40 501 aaKnown RBP6.88□□□□□ -1.31
NF1-208ENST00000471572 EBF1Q9UH73 591 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms