RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 TMEM132DQ14C87 1099 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 VARS2Q5ST30 1063 aaKnown RBP17.04■□□□□ 0.32
HDAC6-218ENST00000470942 RSPO2Q6UXX9 243 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-218ENST00000470942 CCDC149Q6ZUS6 474 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 TDRD5Q8NAT2 981 aaKnown RBP17.04■□□□□ 0.32
HDAC6-218ENST00000470942 SUSD3Q96L08 255 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 FAM213AQ9BRX8 229 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 ASB7Q9H672 318 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 ZDHHC7Q9NXF8 308 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 FBXW11Q9UKB1 542 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 BACE2Q9Y5Z0 518 aa17.04■□□□□ 0.32
HDAC6-218ENST00000470942 A0A1B0GVL5 298 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 ZMYND10O75800 440 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 NFICP08651 508 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 GARTP22102 1010 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 ARPP19P56211 112 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 CNNM4Q6P4Q7 775 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 CRELD2Q6UXH1 353 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-218ENST00000470942 CYP26C1Q6V0L0 522 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 DSTYKQ6XUX3 929 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 UNC13DQ70J99 1090 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 APPL2Q8NEU8 664 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 ACSF2Q96CM8 615 aaPredicted RBP17.03■□□□□ 0.32
HDAC6-218ENST00000470942 SAAL1Q96ER3 474 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 LRFN3Q9BTN0 628 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 PRKD2Q9BZL6 878 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 PCIF1Q9H4Z3 704 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 DERAQ9Y315 318 aa17.03■□□□□ 0.32
HDAC6-218ENST00000470942 GOLGA8IPA6NC78 632 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 GOLGA8JA6NMD2 632 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 GPR37L1O60883 481 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 LDHAP00338 332 aaKnown RBP17.02■□□□□ 0.32
HDAC6-218ENST00000470942 C8AP07357 584 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 PFKFB1P16118 471 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 CMA1P23946 247 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 CUL4BQ13620 913 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 CTXN3Q4LDR2 81 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 FAM26FQ5R3K3 315 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 PPM1LQ5SGD2 360 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 ARMCX5Q6P1M9 558 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 OTOP3Q7RTS5 596 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 GRAMD1CQ8IYS0 662 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 PLCD3Q8N3E9 789 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 ZSWIM2Q8NEG5 633 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 ZNF707Q96C28 371 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-218ENST00000470942 SCAND2PQ9GZW5 306 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-218ENST00000470942 C11orf16Q9NQ32 467 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 PCDHB8Q9UN66 801 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 USTQ9Y2C2 406 aa17.02■□□□□ 0.32
HDAC6-218ENST00000470942 DOCK6Q96HP0 2047 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 TRIOO75962 3097 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 PPEF2O14830 753 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 IL18RAPO95256 599 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 SLFN14P0C7P3 912 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 POU5F1Q01860 360 aaKnown RBP17.01■□□□□ 0.31
HDAC6-218ENST00000470942 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 SLC7A14Q8TBB6 771 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 EDAQ92838 391 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 CBWD1Q9BRT8 395 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 RHOBTB2Q9BYZ6 727 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 WDR6Q9NNW5 1121 aaKnown RBP17.01■□□□□ 0.31
HDAC6-218ENST00000470942 DPP3Q9NY33 737 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 LIMD1Q9UGP4 676 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 FBXL5Q9UKA1 691 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 POLIQ9UNA4 740 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 C2CD2Q9Y426 696 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 TIMM13Q9Y5L4 95 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-218ENST00000470942 SCN1AP35498 2009 aa17.01■□□□□ 0.31
HDAC6-218ENST00000470942 CLUHO75153 1309 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 M0QZQ0 153 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 EIF3DO15371 548 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC6-218ENST00000470942 CCL16O15467 120 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 EXTL3O43909 919 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 HNRNPA1P09651 372 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC6-218ENST00000470942 GBP2P32456 591 aaPredicted RBP17■□□□□ 0.31
HDAC6-218ENST00000470942 ELF1P32519 619 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 ZXDAP98168 799 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 ROR1Q01973 937 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 MRPL58Q14197 206 aaKnown RBP17■□□□□ 0.31
HDAC6-218ENST00000470942 PTPN21Q16825 1174 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 C9orf57Q5W0N0 161 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 USP37Q86T82 979 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 BRSK2Q8IWQ3 736 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 ZDHHC14Q8IZN3 488 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 ZNF507Q8TCN5 953 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 PAGE5Q96GU1 130 aa17■□□□□ 0.31
HDAC6-218ENST00000470942 RBAKQ9NYW8 714 aaPredicted RBP17■□□□□ 0.31
HDAC6-218ENST00000470942 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 PIRO00625 290 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 ACTN4O43707 911 aaKnown RBP16.99■□□□□ 0.31
HDAC6-218ENST00000470942 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 XYLBO75191 536 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 COL9A1P20849 921 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 SYKP43405 635 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 LILRA4P59901 499 aa16.99■□□□□ 0.31
HDAC6-218ENST00000470942 TFAMQ00059 246 aaKnown RBP16.99■□□□□ 0.31
HDAC6-218ENST00000470942 YWHAHQ04917 246 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms