RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
SREBF1-209ENST00000470247 FNDC1Q4ZHG4 1894 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 SCN1AP35498 2009 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 CASTOR2A6NHX0 329 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 F8W810 466 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 RNF225M0QZC1 329 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 SPTLC1O15269 473 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 XPOTO43592 962 aaKnown RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 PHACTR2O75167 634 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 STAU1O95793 577 aaKnown RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 RPL9P32969 192 aaKnown RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 CLCNKBP51801 687 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 SGSM1Q2NKQ1 1148 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 PAN2Q504Q3 1202 aaKnown RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 GJB7Q6PEY0 223 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 ARHGEF19Q8IW93 802 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 URGCPQ8TCY9 931 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 RSPH1Q8WYR4 309 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 RABGGTAQ92696 567 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 LSM14BQ9BX40 385 aaKnown RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 NAA15Q9BXJ9 866 aaKnown RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 TTYH3Q9C0H2 523 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 GANQ9H2C0 597 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.12□□□□□ -0.472e-24■■■■■ 223.6
SREBF1-209ENST00000470247 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 AJAP1Q9UKB5 411 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-209ENST00000470247 PDE4DIPQ5VU43 2346 aa12.12□□□□□ -0.47
SREBF1-209ENST00000470247 ITIH6Q6UXX5 1313 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 PODXLO00592 558 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 ZC3H11AO75152 810 aaKnown RBP eCLIP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 ITGB1P05556 798 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 GALTP07902 379 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 KRT19P08727 400 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 ATP2A2P16615 1042 aaKnown RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 CDC25BP30305 580 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 ATICP31939 592 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 BMP8BP34820 402 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 PIK3CAP42336 1068 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 LILRA4P59901 499 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 CETN1Q12798 172 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 TRPC3Q13507 836 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 LIMS2Q7Z4I7 341 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 CMTR2Q8IYT2 770 aaKnown RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 LRRC43Q8N309 656 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 LRRC52Q8N7C0 313 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 KAT5Q92993 513 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 DDX27Q96GQ7 796 aaKnown RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 HPDLQ96IR7 371 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 KREMEN1Q96MU8 473 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 MRPL9Q9BYD2 267 aaKnown RBP12.11□□□□□ -0.47
SREBF1-209ENST00000470247 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 MARCH5Q9NX47 278 aa12.11□□□□□ -0.47
SREBF1-209ENST00000470247 GRXCR1A8MXD5 290 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 TMEM189-UBE2V1I3L0A0 370 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 CAPN15O75808 1086 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 EFEMP2O95967 443 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 TPM3P06753 285 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 UCHL3P15374 230 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 SLC11A1P49279 550 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
SREBF1-209ENST00000470247 LRMPQ12912 555 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 FIGNQ5HY92 759 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 SPECC1LQ69YQ0 1117 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 IQCEQ6IPM2 695 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 DCLRE1AQ6PJP8 1040 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 TMEM173Q86WV6 379 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-209ENST00000470247 UBR7Q8N806 425 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 TAF4BQ92750 862 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 UROC1Q96N76 676 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 NT5C1BQ96P26 610 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 RAD9AQ99638 391 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 TMEM175Q9BSA9 504 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 UBE2OQ9C0C9 1292 aaKnown RBP12.1□□□□□ -0.47
SREBF1-209ENST00000470247 SDCBP2Q9H190 292 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 MTIF3Q9H2K0 278 aaKnown RBP12.1□□□□□ -0.47
SREBF1-209ENST00000470247 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-209ENST00000470247 GDAP2Q9NXN4 497 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 APEX2Q9UBZ4 518 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 FBXL5Q9UKA1 691 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 POLIQ9UNA4 740 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 FHOD1Q9Y613 1164 aa12.1□□□□□ -0.47
SREBF1-209ENST00000470247 MRPL42Q9Y6G3 142 aaKnown RBP12.1□□□□□ -0.47
SREBF1-209ENST00000470247 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
SREBF1-209ENST00000470247 LCHNA4D1U4 455 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 NRP1O14786 923 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 ARHGEF15O94989 841 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 KIF4AO95239 1232 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 GYPCP04921 128 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 ALDH2P05091 517 aa12.09□□□□□ -0.47
SREBF1-209ENST00000470247 ASPAP45381 313 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms