RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 IGFBP6P24592 240 aaPredicted RBP19.13■□□□□ 0.65
MRPL28-208ENST00000469744 DSG1Q02413 1049 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 STRN3Q13033 797 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 FILIP1LQ4L180 1135 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 APTXQ7Z2E3 356 aaKnown RBP19.13■□□□□ 0.65
MRPL28-208ENST00000469744 APBB1IPQ7Z5R6 666 aaPredicted RBP19.13■□□□□ 0.65
MRPL28-208ENST00000469744 PPFIBP1Q86W92 1011 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 ADSSL1Q8N142 457 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 RIN2Q8WYP3 895 aaPredicted RBP19.13■□□□□ 0.65
MRPL28-208ENST00000469744 RAD54LQ92698 747 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 NTPCRQ9BSD7 190 aaKnown RBP19.13■□□□□ 0.65
MRPL28-208ENST00000469744 GOLGA2P5Q9HBQ8 144 aa19.13■□□□□ 0.65
MRPL28-208ENST00000469744 LIMA1Q9UHB6 759 aaKnown RBP19.13■□□□□ 0.65
MRPL28-208ENST00000469744 VWA8A3KMH1 1905 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 CCP110O43303 1012 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 PROZP22891 400 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 GRM5P41594 1212 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 SMTNP53814 917 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 ITIH3Q06033 890 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 USP41Q3LFD5 358 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 KMT5BQ4FZB7 885 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 SEZ6Q53EL9 994 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 SPECC1LQ69YQ0 1117 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 KLHL10Q6JEL2 608 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 PRSS55Q6UWB4 352 aaPredicted RBP19.12■□□□□ 0.65
MRPL28-208ENST00000469744 MPZL3Q6UWV2 235 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 NOC3LQ8WTT2 800 aaKnown RBP19.12■□□□□ 0.65
MRPL28-208ENST00000469744 DHTKD1Q96HY7 919 aaPredicted RBP19.12■□□□□ 0.65
MRPL28-208ENST00000469744 PPP1R10Q96QC0 940 aaKnown RBP19.12■□□□□ 0.65
MRPL28-208ENST00000469744 CCDC94Q9BW85 323 aaPredicted RBP19.12■□□□□ 0.65
MRPL28-208ENST00000469744 CHST7Q9NS84 486 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 CTNND2Q9UQB3 1225 aa19.12■□□□□ 0.65
MRPL28-208ENST00000469744 SF3B1O75533 1304 aaKnown RBP eCLIP19.11■□□□□ 0.654e-8■■■■■ 34.5
MRPL28-208ENST00000469744 KIF2AO00139 706 aaPredicted RBP19.11■□□□□ 0.65
MRPL28-208ENST00000469744 GPR37L1O60883 481 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 TUBB4AP04350 444 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 ADH1AP07327 375 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 SPATA31D3P0C874 917 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 TPD52L1Q16890 204 aaPredicted RBP19.11■□□□□ 0.65
MRPL28-208ENST00000469744 RTP2Q5QGT7 225 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 SPATA31D4Q6ZUB0 917 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 ANKRD20A12PQ8NF67 263 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 NELFBQ8WX92 580 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 TRIM9Q9C026 710 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 ZHX3Q9H4I2 956 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 MAN1C1Q9NR34 630 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 LARSQ9P2J5 1176 aaKnown RBP19.11■□□□□ 0.65
MRPL28-208ENST00000469744 ODF2LQ9ULJ1 636 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 SSX2IPQ9Y2D8 614 aa19.11■□□□□ 0.65
MRPL28-208ENST00000469744 FAM13AO94988 1023 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 KRT18P05783 430 aaKnown RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 MCF2P10911 925 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 PRCPP42785 496 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 YARSP54577 528 aaKnown RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 NCKAP1LP55160 1127 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 SOX4Q06945 474 aaPredicted RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 HERC4Q5GLZ8 1057 aaPredicted RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 FAM171A1Q5VUB5 890 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 SV2BQ7L1I2 683 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 DENND4AQ7Z401 1863 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 CEP57Q86XR8 500 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 PALB2Q86YC2 1186 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 SMYD4Q8IYR2 804 aaPredicted RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 CCAR2Q8N163 923 aaKnown RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 MYCT1Q8N699 235 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 MYRIPQ8NFW9 859 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 LARP4BQ92615 738 aaKnown RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 BICD1Q96G01 975 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 SFXN1Q9H9B4 322 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 RXFP1Q9HBX9 757 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 TECTAO75443 2155 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 ITIH6Q6UXX5 1313 aa19.1■□□□□ 0.65
MRPL28-208ENST00000469744 PDCD11Q14690 1871 aaKnown RBP19.1■□□□□ 0.65
MRPL28-208ENST00000469744 SMIM28A0A1B0GU29 152 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 PVALEFA0A1B0GWK0 134 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 MEFVO15553 781 aaPredicted RBP19.09■□□□□ 0.65
MRPL28-208ENST00000469744 GLUD1P00367 558 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 PBX1P40424 430 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 MTHFRP42898 656 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 MATR3P43243 847 aaKnown RBP eCLIP19.09■□□□□ 0.65
MRPL28-208ENST00000469744 CLCNKBP51801 687 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 STX17P56962 302 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 HAUS6Q7Z4H7 955 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 SNX27Q96L92 541 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 RIPOR3Q96MK2 946 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 ZMAT2Q96NC0 199 aaKnown RBP19.09■□□□□ 0.65
MRPL28-208ENST00000469744 ACAP3Q96P50 834 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 HAPLN2Q9GZV7 340 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 TOPORSQ9NS56 1045 aaPredicted RBP19.09■□□□□ 0.65
MRPL28-208ENST00000469744 C2CD4DB7Z1M9 353 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 K7ENM7 598 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 PSMA7O14818 248 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 TOM1L1O75674 476 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 ALKAL1Q6UXT8 129 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 NYAP1Q6ZVC0 841 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 C3orf58Q8NDZ4 430 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 NECTIN4Q96NY8 510 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 TTPALQ9BTX7 342 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 THAP9Q9H5L6 903 aa19.09■□□□□ 0.65
MRPL28-208ENST00000469744 PARVGQ9HBI0 331 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms