RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 EMC2Q15006 297 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 AMHR2Q16671 573 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 SLC27A1Q6PCB7 646 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 PIP4P1Q86T03 277 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 FERMT3Q86UX7 667 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 ELMOD1Q8N336 334 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 TMTC2Q8N394 836 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 CAMKK1Q8N5S9 505 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 E2F7Q96AV8 911 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 MTA3Q9BTC8 594 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 DHX33Q9H6R0 707 aaKnown RBP13.98□□□□□ -0.17
HDAC6-217ENST00000469223 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
HDAC6-217ENST00000469223 COL12A1Q99715 3063 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 PCDH15Q96QU1 1955 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 ATG13O75143 517 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 PSMD10O75832 226 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 RDXP35241 583 aaKnown RBP13.97□□□□□ -0.17
HDAC6-217ENST00000469223 LIFRP42702 1097 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 ARPP19P56211 112 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 MBTD1Q05BQ5 628 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 NCBP1Q09161 790 aaKnown RBP13.97□□□□□ -0.17
HDAC6-217ENST00000469223 STXBP5Q5T5C0 1151 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 IQCEQ6IPM2 695 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 FSTL4Q6MZW2 842 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 ANKS3Q6ZW76 656 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 TCEAL8Q8IYN2 117 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 ZNF461Q8TAF7 563 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 PIGKQ92643 395 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 CEP170P1Q96L14 293 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 CXCL16Q9H2A7 254 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 CEP72Q9P209 647 aa13.97□□□□□ -0.17
HDAC6-217ENST00000469223 DENND4CQ5VZ89 1909 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 COL6A6A6NMZ7 2263 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 ABLIM3O94929 683 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 APBB3O95704 486 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 BCKDHBP21953 392 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 RFC5P40937 340 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 PTENP60484 403 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 PCBP1Q15365 356 aaKnown RBP eCLIP13.96□□□□□ -0.17
HDAC6-217ENST00000469223 NAB2Q15742 525 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 ZNF423Q2M1K9 1284 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 ARHGAP29Q52LW3 1261 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 TRIM61Q5EBN2 209 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 HAUS6Q7Z4H7 955 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 UBL7Q96S82 380 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-217ENST00000469223 TMEM209Q96SK2 561 aa13.96□□□□□ -0.17
HDAC6-217ENST00000469223 RBM28Q9NW13 759 aaKnown RBP13.96□□□□□ -0.17
HDAC6-217ENST00000469223 MYO9AB2RTY4 2548 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 A0A1W2PRU2 124 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 THP07101 528 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 ATF2P15336 505 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 ENGP17813 658 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 DHPSP49366 369 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-217ENST00000469223 EPHA5P54756 1037 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 PSMC5P62195 406 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 TWF1Q12792 350 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 LMAN2Q12907 356 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 RTN1Q16799 776 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 SLC8B1Q6J4K2 584 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 B3GNT9Q6UX72 402 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 SLC39A7Q92504 469 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 ZNF512Q96ME7 567 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-217ENST00000469223 TPSD1Q9BZJ3 242 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 EVLQ9UI08 416 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-217ENST00000469223 RAI2Q9Y5P3 530 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 TEP1Q99973 2627 aaKnown RBP13.95□□□□□ -0.18
HDAC6-217ENST00000469223 MUC22E2RYF6 1773 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-217ENST00000469223 OBSL1O75147 1896 aa13.95□□□□□ -0.18
HDAC6-217ENST00000469223 ESYT2A0FGR8 921 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 TMEM189-UBE2V1I3L0A0 370 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 ASAP2O43150 1006 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 EDIL3O43854 480 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 RECQL4O94761 1208 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 B3GAT3O94766 335 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 EGFP01133 1207 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 BRCC3P46736 316 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 DGKEP52429 567 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 GRSF1Q12849 480 aaKnown RBP eCLIP13.94□□□□□ -0.18
HDAC6-217ENST00000469223 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 CAPSQ13938 189 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 ITPRIPL2Q3MIP1 535 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 TMEM196Q5HYL7 178 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 TTC22Q5TAA0 569 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 APOA5Q6Q788 366 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 ARID3BQ8IVW6 561 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-217ENST00000469223 LEMD2Q8NC56 503 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 RUFY2Q8WXA3 655 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 NUSAP1Q9BXS6 441 aaKnown RBP13.94□□□□□ -0.18
HDAC6-217ENST00000469223 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
HDAC6-217ENST00000469223 C6orf50Q9HD87 102 aa13.94□□□□□ -0.18
HDAC6-217ENST00000469223 CITO14578 2027 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 ATXN2Q99700 1313 aaKnown RBP13.93□□□□□ -0.18
HDAC6-217ENST00000469223 DPYSL4O14531 572 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 TBX3O15119 743 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 PRAMEF12O95522 483 aa13.93□□□□□ -0.18
HDAC6-217ENST00000469223 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-217ENST00000469223 PFKFB3Q16875 520 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms