RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 TMEM132DQ14C87 1099 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CTXN3Q4LDR2 81 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 PPM1LQ5SGD2 360 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 LIN9Q5TKA1 542 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 SPATA1Q5VX52 437 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 DSTYKQ6XUX3 929 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CCDC149Q6ZUS6 474 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CD302Q8IX05 232 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 TDRD5Q8NAT2 981 aaKnown RBP12.53□□□□□ -0.4
CDHR3-205ENST00000468143 BEST2Q8NFU1 509 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 EDAQ92838 391 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 SUSD3Q96L08 255 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 PRKD2Q9BZL6 878 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 TMEM206Q9H813 350 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
CDHR3-205ENST00000468143 SYN3O14994 580 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 SPTLC1O15269 473 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 XPOTO43592 962 aaKnown RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 C1RP00736 705 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 PFKFB1P16118 471 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 GBP2P32456 591 aaPredicted RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 HOXD13P35453 343 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 NTHL1P78549 312 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ZXDAP98168 799 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ROR1Q01973 937 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ALCAMQ13740 583 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 MRPL58Q14197 206 aaKnown RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 C9orf57Q5W0N0 161 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 GRASPQ7Z6J2 395 aaPredicted RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 NELFCDQ8IXH7 590 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 CEP57L1Q8IYX8 460 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ST13P5Q8NFI4 369 aaPredicted RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 SLC7A14Q8TBB6 771 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ACSF2Q96CM8 615 aaPredicted RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 FAM84AQ96KN4 292 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 SMOC2Q9H3U7 446 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 ASB7Q9H672 318 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 GDPD2Q9HCC8 539 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 WDR6Q9NNW5 1121 aaKnown RBP12.52□□□□□ -0.41
CDHR3-205ENST00000468143 FBXL5Q9UKA1 691 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
CDHR3-205ENST00000468143 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 MYH15Q9Y2K3 1946 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 WDR27A2RRH5 827 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 H7C4K7 107 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 PIRO00625 290 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
CDHR3-205ENST00000468143 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 N4BP1O75113 896 aaKnown RBP12.51□□□□□ -0.41
CDHR3-205ENST00000468143 LDHAP00338 332 aaKnown RBP12.51□□□□□ -0.41
CDHR3-205ENST00000468143 SLFN14P0C7P3 912 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 GARTP22102 1010 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 CMA1P23946 247 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 FAM26FQ5R3K3 315 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 SCARA3Q6AZY7 606 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 CNNM4Q6P4Q7 775 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 TRIM67Q6ZTA4 783 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 STXBP4Q6ZWJ1 553 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 UNC13DQ70J99 1090 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 OTOP3Q7RTS5 596 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 EFCAB13Q8IY85 973 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 ZDHHC14Q8IZN3 488 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 APPL2Q8NEU8 664 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 ZNF507Q8TCN5 953 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 PAGE5Q96GU1 130 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 TSPAN18Q96SJ8 248 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 SLC39A2Q9NP94 309 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
CDHR3-205ENST00000468143 USTQ9Y2C2 406 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 DERAQ9Y315 318 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 CLUHO75153 1309 aa12.51□□□□□ -0.41
CDHR3-205ENST00000468143 PRR33A8MZF0 331 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 M0QZQ0 153 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 CLIC2O15247 247 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 EXTL3O43909 919 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 ABLIM3O94929 683 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 SEC24AO95486 1093 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDHR3-205ENST00000468143 OR4Q2P0C623 313 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 ELF1P32519 619 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDHR3-205ENST00000468143 CDR1P51861 262 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 NDUFA8P51970 172 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 LILRA4P59901 499 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 TFAMQ00059 246 aaKnown RBP12.5□□□□□ -0.41
CDHR3-205ENST00000468143 YWHAHQ04917 246 aaPredicted RBP12.5□□□□□ -0.41
CDHR3-205ENST00000468143 ZNF280DQ6N043 979 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 CYP26C1Q6V0L0 522 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 GET4Q7L5D6 327 aaPredicted RBP12.5□□□□□ -0.41
CDHR3-205ENST00000468143 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
CDHR3-205ENST00000468143 GPD1LQ8N335 351 aa12.5□□□□□ -0.41
CDHR3-205ENST00000468143 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms