RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 RFX7Q2KHR2 1363 aa3.84□□□□□ -1.79
SORT1-202ENST00000466471 CEMIPQ8WUJ3 1361 aa3.84□□□□□ -1.79
SORT1-202ENST00000466471 HEG1Q9ULI3 1381 aa3.84□□□□□ -1.79
SORT1-202ENST00000466471 SPTAN1Q13813 2472 aaKnown RBP3.84□□□□□ -1.8
SORT1-202ENST00000466471 ABCA12Q86UK0 2595 aa3.84□□□□□ -1.8
SORT1-202ENST00000466471 TEX15Q9BXT5 2789 aa3.84□□□□□ -1.8
SORT1-202ENST00000466471 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 BLACEA4D250 179 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 KLHL33A6NCF5 533 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CCDC69A6NI79 296 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 FAM47E-STBD1D6RA91 191 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 MAFGO15525 162 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 KIF1CO43896 1103 aaKnown RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 F13BP05160 661 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 RHCEP18577 417 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CASP2P42575 452 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CCT5P48643 541 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 NEK3P51956 506 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ADKP55263 362 aaKnown RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 CORO7P57737 925 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 RHDQ02161 417 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CYP4F3Q08477 520 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ADCY1Q08828 1119 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 SCRN1Q12765 414 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 RESTQ13127 1097 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 SLC39A6Q13433 755 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 LRRC32Q14392 662 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ELF2Q15723 593 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 STX1AQ16623 288 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ZSCAN26Q16670 478 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ME3Q16798 604 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ANO6Q4KMQ2 910 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 AMOTQ4VCS5 1084 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ALFQ53S48 1182 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 COBLL1Q53SF7 1204 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 EMC10Q5UCC4 262 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CCDC70Q6NSX1 233 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CC2D1AQ6P1N0 951 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 TMCO3Q6UWJ1 677 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 B3GNT9Q6UX72 402 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 LUZP1Q86V48 1076 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 APOBEC3FQ8IUX4 373 aaKnown RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 NXPE1Q8N323 547 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 PAF1Q8N7H5 531 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ZNF610Q8N9Z0 462 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 C12orf50Q8NA57 414 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 MSANTD4Q8NCY6 345 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 PCDH19Q8TAB3 1148 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 FRS2Q8WU20 508 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CHTF18Q8WVB6 975 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 RUFY2Q8WXA3 655 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 BRF1Q92994 677 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 FBXW5Q969U6 566 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 OPTNQ96CV9 577 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 RMDN1Q96DB5 314 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 DDX11Q96FC9 970 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 PPP1R13BQ96KQ4 1090 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 C16orf45Q96MC5 204 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 ACAP3Q96P50 834 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 YIPF2Q9BWQ6 316 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 BOCQ9BWV1 1114 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 LGR4Q9BXB1 951 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 FUT8Q9BYC5 575 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 TRIM5Q9C035 493 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 NYXQ9GZU5 481 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 PRDM14Q9GZV8 571 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 RNF38Q9H0F5 515 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 TMX4Q9H1E5 349 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 ASCC2Q9H1I8 757 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 IL25Q9H293 177 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 TNMDQ9H2S6 317 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 VIPAS39Q9H9C1 493 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 MED4Q9NPJ6 270 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 JADE2Q9NQC1 790 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 GPATCH2Q9NW75 528 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 THG1LQ9NWX6 298 aaKnown RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 MKS1Q9NXB0 559 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 DACT1Q9NYF0 836 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 HMG20BQ9P0W2 317 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 USP36Q9P275 1121 aaKnown RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 NRBP1Q9UHY1 535 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 PNMA2Q9UL42 364 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 PHTF1Q9UMS5 762 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 GTF2A1LQ9UNN4 478 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 GPR55Q9Y2T6 319 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 PCDHA8Q9Y5H6 950 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 ATXN2Q99700 1313 aaKnown RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 COL4A4P53420 1690 aaPredicted RBP3.83□□□□□ -1.8
SORT1-202ENST00000466471 ITPR3Q14573 2671 aa3.83□□□□□ -1.8
SORT1-202ENST00000466471 CFAP46Q8IYW2 2715 aa3.82□□□□□ -1.8
SORT1-202ENST00000466471 NEDD4P46934 1319 aa3.82□□□□□ -1.8
SORT1-202ENST00000466471 MAP3K15Q6ZN16 1313 aa3.82□□□□□ -1.8
SORT1-202ENST00000466471 PTPDC1A2A3K4 754 aa3.82□□□□□ -1.8
SORT1-202ENST00000466471 C2orf71A6NGG8 1288 aa3.82□□□□□ -1.8
SORT1-202ENST00000466471 SRRM3A6NNA2 597 aaPredicted RBP3.82□□□□□ -1.8
SORT1-202ENST00000466471 USP27XA6NNY8 438 aa3.82□□□□□ -1.8
SORT1-202ENST00000466471 A6NNZ2 444 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms