RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 CACNA2D2Q9NY47 1150 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 GTSE1Q9NYZ3 720 aa16.26■□□□□ 0.19
HMGXB4-206ENST00000466438 GOLGA8AA7E2F4 631 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 GOLGA8BA8MQT2 603 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 H0Y626 953 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 TRAPPC3O43617 180 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 B3GAT3O94766 335 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 TRIM16O95361 564 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 SEC24AO95486 1093 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 ARHGAP29Q52LW3 1261 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 HAUS6Q7Z4H7 955 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 TBC1D32Q96NH3 1257 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 MKNK1Q9BUB5 465 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 C22orf23Q9BZE7 217 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 SNTG2Q9NY99 539 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 WRAP73Q9P2S5 460 aaPredicted RBP16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
HMGXB4-206ENST00000466438 NUP205Q92621 2012 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 EML1O00423 815 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 DCLK1O15075 740 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 PRKCBP05771 671 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 CDC27P30260 824 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 VASPP50552 380 aaPredicted RBP16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 SIM1P81133 766 aaPredicted RBP16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 CAPSQ13938 189 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 SHKBP1Q8TBC3 707 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 ETNPPLQ8TBG4 499 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 TMEM209Q96SK2 561 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 CEP72Q9P209 647 aa16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 ASCC3Q8N3C0 2202 aaKnown RBP16.24■□□□□ 0.19
HMGXB4-206ENST00000466438 CYP3A7-CYP3A51PA0A087WV96 503 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 SPAARA0A1B0GVQ0 90 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 RECQL4O94761 1208 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 TDP2O95551 362 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 CYP3A7P24462 503 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 IGFBP6P24592 240 aaPredicted RBP16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 YWHABP31946 246 aaKnown RBP16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 RDXP35241 583 aaKnown RBP16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 TPGS2Q68CL5 300 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 ZFYVE19Q96K21 471 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 HHIPQ96QV1 700 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 XPNPEP1Q9NQW7 623 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 NAV2Q8IVL1 2488 aa16.23■□□□□ 0.19
HMGXB4-206ENST00000466438 ARID2Q68CP9 1835 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 PATE3B3GLJ2 98 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 SLC27A2O14975 620 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 P4HBP07237 508 aaKnown RBP16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 GBP1P32455 592 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 RCAN1P53805 252 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 ARPP19P56211 112 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 IRX4P78413 519 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 SCAPQ12770 1279 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 TWF1Q12792 350 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 PPP2R5CQ13362 524 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 TMEM196Q5HYL7 178 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 PMS2CLQ68D20 193 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 CD300LGQ6UXG3 332 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 OTUD6AQ7L8S5 288 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 C11orf74Q86VG3 221 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 C4orf19Q8IY42 314 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 CCDC148Q8NFR7 591 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 ASAP3Q8TDY4 903 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 TBCKQ8TEA7 893 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 ANO2Q9NQ90 1003 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 PCNX2A6NKB5 2137 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 CACNA1EQ15878 2313 aa16.22■□□□□ 0.19
HMGXB4-206ENST00000466438 I3L4J1 428 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 MEFVO15553 781 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 CLCNKBP51801 687 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 TNK2Q07912 1038 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 GRSF1Q12849 480 aaKnown RBP eCLIP16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 LMAN2Q12907 356 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 XKR9Q5GH70 373 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 FSTL4Q6MZW2 842 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 CYP2U1Q7Z449 544 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 PIP4P1Q86T03 277 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 ARID3BQ8IVW6 561 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 CHCHD4Q8N4Q1 142 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 UROC1Q96N76 676 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 LRRC3BQ96PB8 259 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 LXNQ9BS40 222 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 OBP2AQ9NY56 170 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 EBF1Q9UH73 591 aa16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 EVLQ9UI08 416 aaPredicted RBP16.21■□□□□ 0.19
HMGXB4-206ENST00000466438 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 A0A1W2PRU2 124 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 UPK3BL1B0FP48 263 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 UPK3BL2E5RIL1 263 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 DPYSL4O14531 572 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 TBX3O15119 743 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 RNF40O75150 1001 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 APBB3O95704 486 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 ADD1P35611 737 aaKnown RBP16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 BRCC3P46736 316 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 C19orf57Q0VDD7 668 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 PTPAQ15257 358 aa16.2■□□□□ 0.18
HMGXB4-206ENST00000466438 UPP1Q16831 310 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms