RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 RNASE9P60153 205 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 MAGOHP61326 146 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 NOMO3P69849 1222 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 GUCY1A3Q02108 690 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 CUL2Q13617 745 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 MXD4Q14582 209 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ACAP1Q15027 740 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 TARBP2Q15633 366 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 KYAT1Q16773 422 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ODF2Q5BJF6 829 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 PLA2G4FQ68DD2 849 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 KCTD16Q68DU8 428 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 FOXR1Q6PIV2 292 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 MMS22LQ6ZRQ5 1243 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 TAS1R3Q7RTX0 852 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 VSIG1Q86XK7 387 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 DDX42Q86XP3 938 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 TDRPQ86YL5 185 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC60Q8IWA6 550 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 C10orf67Q8IYJ2 551 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 TTC39CQ8N584 583 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 RDH13Q8NBN7 331 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 DEPTORQ8TB45 409 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ATXN2LQ8WWM7 1075 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 BSNDQ8WZ55 320 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 C18orf8Q96DM3 657 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 BICD1Q96G01 975 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 DDX27Q96GQ7 796 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 ZNF317Q96PQ6 595 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 XPO6Q96QU8 1125 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC77Q9BR77 488 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 NFKBIZQ9BYH8 718 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 CELF4Q9BZC1 486 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 DCLK3Q9C098 648 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 POLR3FQ9H1D9 316 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 DPH5Q9H2P9 285 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 IKZF4Q9H2S9 585 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 KDM4CQ9H3R0 1056 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 GPRC5CQ9NQ84 441 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 NRBP2Q9NSY0 501 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 PARVAQ9NVD7 372 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 DDX56Q9NY93 547 aaKnown RBP7.3□□□□□ -1.24
CDHR3-204ENST00000466351 IP6K2Q9UHH9 426 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 PCDHGC3Q9UN70 934 aa7.3□□□□□ -1.24
CDHR3-204ENST00000466351 POLR2AP24928 1970 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MROH7Q68CQ1 1323 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 SPDYE16A6NNV3 312 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TISP43B9A030 160 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 K7ERI5 159 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 IRF6O14896 467 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ADCY3O60266 1144 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 CDH16O75309 829 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TOM1L1O75674 476 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TTC4O95801 387 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ASS1P00966 412 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 RARAP10276 462 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ATF2P15336 505 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MMP8P22894 467 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 EIF4BP23588 611 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 IVDP26440 423 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 FLT3P36888 993 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ATP1A2P50993 1020 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 PLTPP55058 493 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 NOP14P78316 857 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 KRT17Q04695 432 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 PIGHQ14442 188 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 STAT4Q14765 748 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 PPP1R7Q15435 360 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TRADDQ15628 312 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ZC3H12AQ5D1E8 599 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 IER5Q5VY09 327 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TDRD10Q5VZ19 366 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TTC27Q6P3X3 843 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 METTL7BQ6UX53 244 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 CCDC121Q6ZUS5 278 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 RPAINQ86UA6 219 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 RIOX2Q8IUF8 465 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 GPIHBP1Q8IV16 184 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MICALL2Q8IY33 904 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 RCOR2Q8IZ40 523 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 TTC13Q8NBP0 860 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 PROCA1Q8NCQ7 364 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MAGEC3Q8TD91 643 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 GLG1Q92896 1179 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 KAT5Q92993 513 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 NKD2Q969F2 451 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 GRAMD1AQ96CP6 724 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 KLRG1Q96E93 195 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 SAAL1Q96ER3 474 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 CABS1Q96KC9 395 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MRPL4Q9BYD3 311 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 MIS12Q9H081 205 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 ZNF302Q9NR11 478 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 HOMER2Q9NSB8 354 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 RBAKQ9NYW8 714 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 WDR35Q9P2L0 1181 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 SEPT9Q9UHD8 586 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 HACL1Q9UJ83 578 aa7.29□□□□□ -1.24
CDHR3-204ENST00000466351 NOVA2Q9UNW9 492 aaKnown RBP7.29□□□□□ -1.24
CDHR3-204ENST00000466351 SHOC2Q9UQ13 582 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms