RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 RETP07949 1114 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 SLC3A2P08195 630 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 SRFP11831 508 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 SCG2P13521 617 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 TGM1P22735 817 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 PPM1AP35813 382 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 RPL6Q02878 288 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 SMC1AQ14683 1233 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 CCDC96Q2M329 555 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 LAIR1Q6GTX8 287 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 CELF5Q8N6W0 485 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 ZBTB44Q8NCP5 570 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 CLEC4DQ8WXI8 215 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 EAF2Q96CJ1 260 aaPredicted RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 DNAJC2Q99543 621 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 RNPEPQ9H4A4 650 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 ZNF215Q9UL58 517 aaPredicted RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 PCDHB7Q9Y5E2 793 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 HCFC2Q9Y5Z7 792 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.79□□□□□ -1.32
NCL-208ENST00000466274 OTOGLQ3ZCN5 2332 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 MYH1P12882 1939 aa6.79□□□□□ -1.32
NCL-208ENST00000466274 ZBED9Q6R2W3 1325 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 PTPRSQ13332 1948 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 SRRM3A6NNA2 597 aaPredicted RBP6.78□□□□□ -1.32
NCL-208ENST00000466274 HIDE1A8MVS5 230 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 TAF4O00268 1085 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 CHRNA1P02708 482 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 HPXP02790 462 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 WEE2P0C1S8 567 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 CA8P35219 290 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ADD2P35612 726 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 GIT2Q14161 759 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 LPIN1Q14693 890 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 PPP2R5DQ14738 602 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 CSRP2Q16527 193 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 GAB4Q2WGN9 574 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 CELF3Q5SZQ8 465 aaKnown RBP6.78□□□□□ -1.32
NCL-208ENST00000466274 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ARHGEF16Q5VV41 709 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ZSCAN25Q6NSZ9 544 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 DCLRE1AQ6PJP8 1040 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ATG14Q6ZNE5 492 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 AACSQ86V21 672 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 CABP7Q86V35 215 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 MCF2L2Q86YR7 1114 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ERC1Q8IUD2 1116 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 MAML2Q8IZL2 1156 aaPredicted RBP6.78□□□□□ -1.32
NCL-208ENST00000466274 MRPL43Q8N983 215 aaKnown RBP6.78□□□□□ -1.32
NCL-208ENST00000466274 COLGALT1Q8NBJ5 622 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 PJA1Q8NG27 643 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 DCAF4Q8WV16 495 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 STAMQ92783 540 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 GLG1Q92896 1179 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 CHMP4CQ96CF2 233 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 C16orf70Q9BSU1 422 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 MLXIPQ9HAP2 919 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 PARD6AQ9NPB6 346 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ARHGEF3Q9NR81 526 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 ADAM30Q9UKF2 790 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 STX8Q9UNK0 236 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 SQORQ9Y6N5 450 aa6.78□□□□□ -1.32
NCL-208ENST00000466274 NRCAMQ92823 1304 aa6.77□□□□□ -1.32
NCL-208ENST00000466274 MYO7AQ13402 2215 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 TBKBP1A7MCY6 615 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 M0QZ92 97 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 NOP56O00567 594 aaKnown RBP6.77□□□□□ -1.33
NCL-208ENST00000466274 NCAM2O15394 837 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 LRRN2O75325 713 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 PRDM1O75626 825 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 ARP10275 920 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 TGFB3P10600 412 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 RBM25P49756 843 aaKnown RBP6.77□□□□□ -1.33
NCL-208ENST00000466274 TFAP4Q01664 338 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 APOBRQ0VD83 1088 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 UBE3CQ15386 1083 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 HSDL1Q3SXM5 330 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 FBXO47Q5MNV8 452 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 BTNL9Q6UXG8 535 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 PPFIBP1Q86W92 1011 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 SLC44A3Q8N4M1 653 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 ARHGAP45Q92619 1136 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 RMDN3Q96TC7 470 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 OSBPL6Q9BZF3 934 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 RNF32Q9H0A6 362 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 TRIT1Q9H3H1 467 aaKnown RBP6.77□□□□□ -1.33
NCL-208ENST00000466274 SP110Q9HB58 689 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 SEMA4GQ9NTN9 838 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 SETD4Q9NVD3 440 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 DUSP13Q9UII6 198 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 CDH22Q9UJ99 828 aa6.77□□□□□ -1.33
NCL-208ENST00000466274 NOP58Q9Y2X3 529 aaKnown RBP6.77□□□□□ -1.33
NCL-208ENST00000466274 CCDC171Q6TFL3 1326 aa6.76□□□□□ -1.33
NCL-208ENST00000466274 WDR19Q8NEZ3 1342 aa6.76□□□□□ -1.33
NCL-208ENST00000466274 MICAL3Q7RTP6 2002 aa6.76□□□□□ -1.33
NCL-208ENST00000466274 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
NCL-208ENST00000466274 C2orf71A6NGG8 1288 aa6.76□□□□□ -1.33
NCL-208ENST00000466274 ETV2O00321 342 aaPredicted RBP6.76□□□□□ -1.33
NCL-208ENST00000466274 NARSO43776 548 aaKnown RBP6.76□□□□□ -1.33
NCL-208ENST00000466274 CLASP2O75122 1294 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms