RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 PCDHB8Q9UN66 801 aa13.6□□□□□ -0.23
SOX2-OT-203ENST00000466034 NUB1Q9Y5A7 615 aa13.6□□□□□ -0.23
SOX2-OT-203ENST00000466034 NPHP3-ACAD11A0A0J9YXS1 232 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 TTC26A0AVF1 554 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 ECI2O75521 394 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 MICAL2O94851 1124 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 LRG1P02750 347 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 ADRB2P07550 413 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 RHOP08100 348 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 PTPN2P17706 415 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 ELF1P32519 619 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 LONP1P36776 959 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 UBA7P41226 1012 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 GPC5P78333 572 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 PRKCQQ04759 706 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 ZBTB6Q15916 424 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 ZNF280DQ6N043 979 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 HAUS6Q7Z4H7 955 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 DDX12PQ92771 950 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 TBC1D32Q96NH3 1257 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 REEP2Q9BRK0 252 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 DDX23Q9BUQ8 820 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 OXCT2Q9BYC2 517 aaPredicted RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 BLOC1S4Q9NUP1 217 aa13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 AFF4Q9UHB7 1163 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 MRPS23Q9Y3D9 190 aaKnown RBP13.59□□□□□ -0.23
SOX2-OT-203ENST00000466034 M0QZQ0 153 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 FAM189A1O60320 539 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 SEC24AO95486 1093 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 CXCL8P10145 99 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 ABCD1P33897 745 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 MCM4P33991 863 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 AARSP49588 968 aaKnown RBP eCLIP13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 PFKPQ01813 784 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 SLC5A9Q2M3M2 681 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 CTXN3Q4LDR2 81 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 SEZ6Q53EL9 994 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 PRSS36Q5K4E3 855 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 PJA1Q8NG27 643 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 BICD1Q96G01 975 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 OSBPL6Q9BZF3 934 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 PARVGQ9HBI0 331 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 TUBGCP4Q9UGJ1 667 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 UBQLN1Q9UMX0 589 aaKnown RBP13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 SIT1Q9Y3P8 196 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 INSL5Q9Y5Q6 135 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 GVINP1Q7Z2Y8 2422 aa13.58□□□□□ -0.24
SOX2-OT-203ENST00000466034 MIA3Q5JRA6 1907 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 PRRG1O14668 218 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 ZNF197O14709 1029 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 OGTO15294 1046 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 XPOTO43592 962 aaKnown RBP13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 FAM13AO94988 1023 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 OAZ2O95190 189 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 PLCG1P19174 1290 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 MATR3P43243 847 aaKnown RBP eCLIP13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 LIG4P49917 911 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 CUL4AQ13619 759 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 MLF2Q15773 248 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 SLC44A4Q53GD3 710 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 POTEHQ6S545 545 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 ST13P5Q8NFI4 369 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 BEST2Q8NFU1 509 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 ING5Q8WYH8 240 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 RAD54LQ92698 747 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 FIZ1Q96SL8 496 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 SEMA4AQ9H3S1 761 aa13.57□□□□□ -0.24
SOX2-OT-203ENST00000466034 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 A0A0B4J269 797 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 KANSL1LA0AUZ9 987 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 K7ENM7 598 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 HNRNPDLO14979 420 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 TRAK2O60296 914 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 DCNP07585 359 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 CEBPBP17676 345 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 PAX3P23760 479 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 MARCKSP29966 332 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 TNFSF9P41273 254 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 MAGEA9P43362 315 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 EPHA5P54756 1037 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 ARPP19P56211 112 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 GTF2BQ00403 316 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 GRIN1Q05586 938 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 PDAP1Q13442 181 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 MCM6Q14566 821 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 SF3A1Q15459 793 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 ENOX2Q16206 610 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 MAP4K3Q8IVH8 894 aa13.56□□□□□ -0.24
SOX2-OT-203ENST00000466034 CD302Q8IX05 232 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms