RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PANK4Q9NVE7 773 aa23.68■■□□□ 1.38
LIME1-203ENST00000465591 KMT2EQ8IZD2 1858 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 CCL16O15467 120 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 GCNT3O95395 438 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 CYP3A5P20815 502 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 DNM1Q05193 864 aaKnown RBP23.67■■□□□ 1.38
LIME1-203ENST00000465591 MTMR3Q13615 1198 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 PPM1LQ5SGD2 360 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 L1TD1Q5T7N2 865 aaKnown RBP23.67■■□□□ 1.38
LIME1-203ENST00000465591 CRELD2Q6UXH1 353 aaPredicted RBP23.67■■□□□ 1.38
LIME1-203ENST00000465591 GRASPQ7Z6J2 395 aaPredicted RBP23.67■■□□□ 1.38
LIME1-203ENST00000465591 GLIS3Q8NEA6 775 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 HPS3Q969F9 1004 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 PBXIP1Q96AQ6 731 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 DHX58Q96C10 678 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 CHAMP1Q96JM3 812 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 KBTBD4Q9NVX7 518 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 FBXL5Q9UKA1 691 aa23.67■■□□□ 1.38
LIME1-203ENST00000465591 AGO2Q9UKV8 859 aaKnown RBP23.67■■□□□ 1.38
LIME1-203ENST00000465591 WDR27A2RRH5 827 aa23.66■■□□□ 1.38
LIME1-203ENST00000465591 PDGFBP01127 241 aaPredicted RBP23.66■■□□□ 1.38
LIME1-203ENST00000465591 HNRNPA1P09651 372 aaKnown RBP eCLIP23.66■■□□□ 1.38
LIME1-203ENST00000465591 PDIA4P13667 645 aaKnown RBP23.66■■□□□ 1.38
LIME1-203ENST00000465591 GBP2P32456 591 aaPredicted RBP23.66■■□□□ 1.38
LIME1-203ENST00000465591 AARSP49588 968 aaKnown RBP eCLIP23.66■■□□□ 1.38
LIME1-203ENST00000465591 SPATA1Q5VX52 437 aa23.66■■□□□ 1.38
LIME1-203ENST00000465591 SLFN12LQ6IEE8 588 aa23.66■■□□□ 1.38
LIME1-203ENST00000465591 PCDHB8Q9UN66 801 aa23.66■■□□□ 1.38
LIME1-203ENST00000465591 PCDHA7Q9UN72 937 aa23.66■■□□□ 1.38
LIME1-203ENST00000465591 M0QZQ0 153 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 HOXA9P31269 272 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 ARPP19P56211 112 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 WNT7BP56706 349 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 GET4Q7L5D6 327 aaPredicted RBP23.65■■□□□ 1.38
LIME1-203ENST00000465591 RSAD2Q8WXG1 361 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 POMGNT1Q8WZA1 660 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 ACCSQ96QU6 501 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 TRIM9Q9C026 710 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 TNMDQ9H2S6 317 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 KCNK12Q9HB15 430 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 HCFC1R1Q9NWW0 138 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 ZDHHC9Q9Y397 364 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 TIMM13Q9Y5L4 95 aaPredicted RBP23.65■■□□□ 1.38
LIME1-203ENST00000465591 TSC2P49815 1807 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 TCHHQ07283 1943 aa23.65■■□□□ 1.38
LIME1-203ENST00000465591 PRPF6O94906 941 aaKnown RBP23.64■■□□□ 1.37
LIME1-203ENST00000465591 ABLIM3O94929 683 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 CTXN3Q4LDR2 81 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 CD302Q8IX05 232 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 UBALD2Q8IYN6 164 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 ST13P5Q8NFI4 369 aaPredicted RBP23.64■■□□□ 1.37
LIME1-203ENST00000465591 ZNF461Q8TAF7 563 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 KCNG4Q8TDN1 519 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 MFSD14AQ96MC6 490 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 EPS15L1Q9UBC2 864 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 POLIQ9UNA4 740 aa23.64■■□□□ 1.37
LIME1-203ENST00000465591 H7C4K7 107 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 SPTLC1O15269 473 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 SEC24AO95486 1093 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 TMEM132DQ14C87 1099 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 UVSSAQ2YD98 709 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 C9orf57Q5W0N0 161 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 EFCAB13Q8IY85 973 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 BEST2Q8NFU1 509 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 SAAL1Q96ER3 474 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 TSPAN18Q96SJ8 248 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 PCDHB13Q9Y5F0 798 aa23.63■■□□□ 1.37
LIME1-203ENST00000465591 POLR2DO15514 142 aaKnown RBP23.62■■□□□ 1.37
LIME1-203ENST00000465591 XPOTO43592 962 aaKnown RBP23.62■■□□□ 1.37
LIME1-203ENST00000465591 FSHRP23945 695 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 CASP1P29466 404 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 ME1P48163 572 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 RESP18Q5W5W9 173 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 ZNF280DQ6N043 979 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 CCDC65Q8IXS2 484 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 FBXL6Q8N531 539 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 IQUBQ8NA54 791 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 APPL2Q8NEU8 664 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 CBWD1Q9BRT8 395 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 CUEDC2Q9H467 287 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 ASB7Q9H672 318 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 DNMT3BQ9UBC3 853 aaKnown RBP23.62■■□□□ 1.37
LIME1-203ENST00000465591 RCOR1Q9UKL0 485 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 EXOC7Q9UPT5 735 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 DERAQ9Y315 318 aa23.62■■□□□ 1.37
LIME1-203ENST00000465591 WDFY4Q6ZS81 3184 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 ANO9A1A5B4 782 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 PIRO00625 290 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 NARSO43776 548 aaKnown RBP23.61■■□□□ 1.37
LIME1-203ENST00000465591 POU2F2P09086 479 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 LAMP2P13473 410 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 ATF2P15336 505 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 HOXD13P35453 343 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 VCPP55072 806 aaKnown RBP23.61■■□□□ 1.37
LIME1-203ENST00000465591 LILRA4P59901 499 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 TDGQ13569 410 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 POSTNQ15063 836 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 ATL3Q6DD88 541 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 ITFG1Q8TB96 612 aa23.61■■□□□ 1.37
LIME1-203ENST00000465591 FAM84AQ96KN4 292 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms