RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 BEST2Q8NFU1 509 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 ZSWIM3Q96MP5 696 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 NELL2Q99435 816 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 CORO1BQ9BR76 489 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 CCDC94Q9BW85 323 aaPredicted RBP11.98□□□□□ -0.49
COL11A1-207ENST00000465209 MRPL4Q9BYD3 311 aaKnown RBP11.98□□□□□ -0.49
COL11A1-207ENST00000465209 HAPLN2Q9GZV7 340 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 CHRDQ9H2X0 955 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 TRPV4Q9HBA0 871 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 TRPV5Q9NQA5 729 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 SLC38A7Q9NVC3 462 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 CEP72Q9P209 647 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 LRWD1Q9UFC0 647 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 LAMA1P25391 3075 aa11.98□□□□□ -0.49
COL11A1-207ENST00000465209 PP2D1A8MPX8 630 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 SEC24BO95487 1268 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 U2AF2P26368 475 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 RPL9P32969 192 aaKnown RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 YARSP54577 528 aaKnown RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 DMP1Q13316 513 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 GAS6Q14393 721 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 SLC10A6Q3KNW5 377 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 WDR44Q5JSH3 913 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 RINT1Q6NUQ1 792 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 MPZL3Q6UWV2 235 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 APBB1IPQ7Z5R6 666 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 TMC8Q8IU68 726 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 HS6ST3Q8IZP7 471 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 SNX29Q8TEQ0 813 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 ZBTB45Q96K62 511 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 LLPHQ9BRT6 129 aaKnown RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 NTPCRQ9BSD7 190 aaKnown RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 LRRC3Q9BY71 257 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 CYP4F11Q9HBI6 524 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 ZFP14Q9HCL3 533 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 ZNF334Q9HCZ1 680 aaPredicted RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 TUBGCP4Q9UGJ1 667 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 AFF4Q9UHB7 1163 aaKnown RBP11.97□□□□□ -0.49
COL11A1-207ENST00000465209 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 DENND4CQ5VZ89 1909 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 ACACBO00763 2458 aa11.97□□□□□ -0.49
COL11A1-207ENST00000465209 CFAP47Q6ZTR5 3102 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 OBSL1O75147 1896 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 CCDC169A6NNP5 214 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 H7C4K7 107 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 M0QZQ0 153 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 PRRG1O14668 218 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 AARSP49588 968 aaKnown RBP eCLIP11.96□□□□□ -0.49
COL11A1-207ENST00000465209 TWF1Q12792 350 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 PTGDRQ13258 359 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 ZNF280DQ6N043 979 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 RNF19BQ6ZMZ0 732 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 PDZD4Q76G19 769 aaPredicted RBP11.96□□□□□ -0.49
COL11A1-207ENST00000465209 TMEM161BQ8NDZ6 487 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 ATRIPQ8WXE1 791 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 DDX12PQ92771 950 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 SMARCD2Q92925 531 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 KCNN1Q92952 543 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 RSPRY1Q96DX4 576 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 ACAP3Q96P50 834 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 IER2Q9BTL4 223 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 FAM126AQ9BYI3 521 aaPredicted RBP11.96□□□□□ -0.49
COL11A1-207ENST00000465209 DNAJC25Q9H1X3 360 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 CRISPLD1Q9H336 500 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 C17orf75Q9HAS0 396 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 KMT5AQ9NQR1 393 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 NCDNQ9UBB6 729 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 LIMCH1Q9UPQ0 1083 aa11.96□□□□□ -0.49
COL11A1-207ENST00000465209 SCN1AP35498 2009 aa11.96□□□□□ -0.5
COL11A1-207ENST00000465209 ASPMQ8IZT6 3477 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 ZNF197O14709 1029 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 SLC16A4O15374 487 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 NCAM2O15394 837 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 FAM189A1O60320 539 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 TOM1L1O75674 476 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 MAPTP10636 758 aaKnown RBP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 CHRNB1P11230 501 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 GJA1P17302 382 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 PSMC3P17980 439 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 GUCY2CP25092 1073 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 CDC25AP30304 524 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 LRPAP1P30533 357 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 ELF1P32519 619 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 VIPR2P41587 438 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 ATXN1P54253 815 aaKnown RBP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 ARPP19P56211 112 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 MCL1Q07820 350 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 NOLC1Q14978 699 aaKnown RBP eCLIP11.95□□□□□ -0.5
COL11A1-207ENST00000465209 ZBTB6Q15916 424 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 HYIQ5T013 277 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 SHKBP1Q8TBC3 707 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 DEPDC1BQ8WUY9 529 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 IRF7Q92985 503 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 DRC1Q96MC2 740 aa11.95□□□□□ -0.5
COL11A1-207ENST00000465209 KIF2CQ99661 725 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms