RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ALKAL1Q6UXT8 129 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 LEMD2Q8NC56 503 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 NETO1Q8TDF5 533 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 ZSWIM3Q96MP5 696 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 LMAN1LQ9HAT1 526 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 POLD4Q9HCU8 107 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 ASAH2Q9NR71 780 aa16.01■□□□□ 0.15
MCF2L-220ENST00000464800 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.01■□□□□ 0.15
MCF2L-220ENST00000464800 CCDC169A6NNP5 214 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 NRG2O14511 850 aaPredicted RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 ZNF263O14978 683 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 JAK2O60674 1132 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 LRP3O75074 770 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 RETP07949 1114 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 RPL9P32969 192 aaKnown RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 ANAPC15P60006 121 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 TWF1Q12792 350 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 MRPL58Q14197 206 aaKnown RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 SAFBQ15424 915 aaKnown RBP eCLIP16■□□□□ 0.15
MCF2L-220ENST00000464800 HS6ST3Q8IZP7 471 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 ZSCAN18Q8TBC5 510 aaPredicted RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 ZNF512Q96ME7 567 aaPredicted RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 ZMAT2Q96NC0 199 aaKnown RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 ACO2Q99798 780 aaKnown RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 MRPL4Q9BYD3 311 aaKnown RBP16■□□□□ 0.15
MCF2L-220ENST00000464800 MAFFQ9ULX9 164 aa16■□□□□ 0.15
MCF2L-220ENST00000464800 NUP210Q8TEM1 1887 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-220ENST00000464800 SLC30A4O14863 429 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 ADRB1P08588 477 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 MYL4P12829 197 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 CPB1P15086 417 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 KCNE1P15382 129 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 CCNE1P24864 410 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 MCM4P33991 863 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 CCT6AP40227 531 aaKnown RBP15.99■□□□□ 0.15
MCF2L-220ENST00000464800 VIPR2P41587 438 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 CXCL12P48061 93 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 EPHA5P54756 1037 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 SATB1Q01826 763 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 SIM2Q14190 667 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-220ENST00000464800 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-220ENST00000464800 C18orf25Q96B23 403 aaPredicted RBP15.99■□□□□ 0.15
MCF2L-220ENST00000464800 MSANTD3Q96H12 275 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 SUSD3Q96L08 255 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 ACAP3Q96P50 834 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 SLITRK6Q9H5Y7 841 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 TRPV4Q9HBA0 871 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 CEP72Q9P209 647 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 CNTN3Q9P232 1028 aa15.99■□□□□ 0.15
MCF2L-220ENST00000464800 AFF4Q9UHB7 1163 aaKnown RBP15.99■□□□□ 0.15
MCF2L-220ENST00000464800 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-220ENST00000464800 MOSPD3O75425 235 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 MCF2P10911 925 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 CHRNB1P11230 501 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 GJA1P17302 382 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 NPTX2P47972 431 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 PEX3P56589 373 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 DMP1Q13316 513 aaPredicted RBP15.98■□□□□ 0.15
MCF2L-220ENST00000464800 LRRC32Q14392 662 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 TEAD2Q15562 447 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 ZNF174Q15697 407 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 PPM1JQ5JR12 505 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 C1orf228Q6PIY5 440 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 MFSD6LQ8IWD5 586 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 APPL2Q8NEU8 664 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 CSGALNACT1Q8TDX6 532 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 E2F7Q96AV8 911 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 TCHPQ9BT92 498 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 TMEM134Q9H6X4 195 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 MYH11P35749 1972 aa15.98■□□□□ 0.15
MCF2L-220ENST00000464800 MAP1BP46821 2468 aaKnown RBP15.97■□□□□ 0.15
MCF2L-220ENST00000464800 NCANO14594 1321 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 HEPACAM2A8MVW5 462 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 ARNTLO00327 626 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 MLLT6P55198 1093 aaPredicted RBP15.97■□□□□ 0.15
MCF2L-220ENST00000464800 GUCY1B3Q02153 619 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 PTGDRQ13258 359 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 ECM1Q16610 540 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 ST3GAL2Q16842 350 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 MPZL3Q6UWV2 235 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 PRR23CQ6ZRP0 262 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 YAF2Q8IY57 180 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 SPEM1Q8N4L4 309 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 DDX12PQ92771 950 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 TARS2Q9BW92 718 aaKnown RBP15.97■□□□□ 0.15
MCF2L-220ENST00000464800 GPR88Q9GZN0 384 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 SEMA4GQ9NTN9 838 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 DDX19AQ9NUU7 478 aaKnown RBP15.97■□□□□ 0.15
MCF2L-220ENST00000464800 ARHGAP28Q9P2N2 729 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 PCDHB8Q9UN66 801 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 YIPF1Q9Y548 306 aa15.97■□□□□ 0.15
MCF2L-220ENST00000464800 GREB1Q4ZG55 1949 aa15.96■□□□□ 0.15
MCF2L-220ENST00000464800 CHURC1-FNTBB4DL54 471 aa15.96■□□□□ 0.15
MCF2L-220ENST00000464800 HIP1RO75146 1068 aa15.96■□□□□ 0.15
MCF2L-220ENST00000464800 HARSP12081 509 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms