RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 UGCGQ16739 394 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 CDCA2Q69YH5 1023 aaPredicted RBP19.58■□□□□ 0.72
HPS3-204ENST00000462030 ZNF449Q6P9G9 518 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 SV2AQ7L0J3 742 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 C4orf33Q8N1A6 199 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 FAM13CQ8NE31 585 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 NAF1Q96HR8 494 aaKnown RBP19.58■□□□□ 0.72
HPS3-204ENST00000462030 OSBPL8Q9BZF1 889 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 ST6GALNAC4Q9H4F1 302 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 RNPEPL1Q9HAU8 725 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 KIAA1586Q9HCI6 787 aa19.58■□□□□ 0.72
HPS3-204ENST00000462030 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.58■□□□□ 0.72
HPS3-204ENST00000462030 YWHABP31946 246 aaKnown RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 FASTKD3Q14CZ7 662 aaKnown RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 PKN2Q16513 984 aaKnown RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 CAPN12Q6ZSI9 719 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 GSTA5Q7RTV2 222 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 RIBC1Q8N443 379 aaPredicted RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 ZCCHC9Q8N567 271 aaKnown RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 BBOF1Q8ND07 529 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 ADAM33Q9BZ11 813 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 TRABDQ9H4I3 376 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 COL20A1Q9P218 1284 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 PROSCO94903 275 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 ABHD2P08910 425 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 T-ENOLP0DO92 83 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 CNGA1P29973 690 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 QARSP47897 775 aaKnown RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 DACT2Q5SW24 774 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 FAM102BQ5T8I3 360 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 PCNX4Q63HM2 1172 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 SLC7A6OSQ96CW6 309 aaPredicted RBP19.57■□□□□ 0.72
HPS3-204ENST00000462030 FBXO28Q9NVF7 368 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 KLHL11Q9NVR0 708 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 TBX20Q9UMR3 447 aa19.57■□□□□ 0.72
HPS3-204ENST00000462030 CBX6O95503 412 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 RPA3P35244 121 aaPredicted RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 GRIK3Q13003 919 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 PLA2G4FQ68DD2 849 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 TRIM68Q6AZZ1 485 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 PODNQ7Z5L7 613 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 LDHDQ86WU2 507 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 AGGF1Q8N302 714 aaeCLIP19.56■□□□□ 0.72
HPS3-204ENST00000462030 FHDC1Q9C0D6 1143 aaPredicted RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 MYCNP04198 464 aaPredicted RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 ZSCAN5DPP0CG00 497 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 EPHB2P29323 1055 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 SSTR3P32745 418 aaPredicted RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 MCCD1P59942 119 aaPredicted RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 SNRPFP62306 86 aaKnown RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 SPARCL1Q14515 664 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.56■□□□□ 0.72
HPS3-204ENST00000462030 MRRFQ96E11 262 aaKnown RBP19.56■□□□□ 0.72
HPS3-204ENST00000462030 CFAP57Q96MR6 1250 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 MRIQ9BWK5 157 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 CYP39A1Q9NYL5 469 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 USTQ9Y2C2 406 aa19.56■□□□□ 0.72
HPS3-204ENST00000462030 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
HPS3-204ENST00000462030 PRPF4O43172 522 aaKnown RBP eCLIP19.55■□□□□ 0.72
HPS3-204ENST00000462030 EDF1O60869 148 aaKnown RBP19.55■□□□□ 0.72
HPS3-204ENST00000462030 NPM3O75607 178 aaKnown RBP19.55■□□□□ 0.72
HPS3-204ENST00000462030 ATP5HO75947 161 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 CFHP08603 1231 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 CALB2P22676 271 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 PEX19P40855 299 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 RAD23BP54727 409 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 PTP4A2Q12974 167 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 SLC1A5Q15758 541 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 SLC39A4Q6P5W5 647 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 TMEM161BQ8NDZ6 487 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 C10orf82Q8WW14 230 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 POMGNT1Q8WZA1 660 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 TBC1D10AQ9BXI6 508 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 CORO1CQ9ULV4 474 aaPredicted RBP19.55■□□□□ 0.72
HPS3-204ENST00000462030 TMX2Q9Y320 296 aa19.55■□□□□ 0.72
HPS3-204ENST00000462030 TPBGLP0DKB5 382 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 FGFR1P11362 822 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 KRT15P19012 456 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 SSR1P43307 286 aaKnown RBP19.54■□□□□ 0.72
HPS3-204ENST00000462030 NSFP46459 744 aaKnown RBP19.54■□□□□ 0.72
HPS3-204ENST00000462030 PDK4Q16654 411 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 LONP2Q86WA8 852 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 RHOT1Q8IXI2 618 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 STK32AQ8WU08 396 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 FAM81BQ96LP2 452 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 IWS1Q96ST2 819 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 C11orf70Q9BRQ4 267 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
HPS3-204ENST00000462030 THSD7AQ9UPZ6 1657 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 LIN7AO14910 233 aaPredicted RBP19.54■□□□□ 0.72
HPS3-204ENST00000462030 PSTPIP1O43586 416 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 UPP2O95045 317 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 ETS1P14921 441 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 CYP24A1Q07973 514 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 MON1BQ7L1V2 547 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 PASD1Q8IV76 773 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 MAP4K3Q8IVH8 894 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 INPP5DQ92835 1189 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 UBN1Q9NPG3 1134 aa19.54■□□□□ 0.72
HPS3-204ENST00000462030 GOLGB1Q14789 3259 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms