RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 POP1Q99575 1024 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 PLVAPQ9BX97 442 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 INTS2Q9H0H0 1204 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 ASB7Q9H672 318 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 CEP72Q9P209 647 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 TRANK1O15050 2925 aa16.38■□□□□ 0.21
TMEM39A-203ENST00000461654 C9IYK1 514 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 TNNC2P02585 160 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 TMEM191BP0C7N4 346 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 RFX1P22670 979 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 DSC3Q14574 896 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 DUOXA2Q1HG44 320 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 SV2AQ7L0J3 742 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 CEP120Q8N960 986 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 OR8K1Q8NGG5 319 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 ANKRD36BP1Q96IX9 119 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 ADAM2Q99965 735 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 LMAN2LQ9H0V9 348 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 PLEKHA5Q9HAU0 1116 aa16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 R3HCC1Q9Y3T6 440 aaKnown RBP16.37■□□□□ 0.21
TMEM39A-203ENST00000461654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 MGEA5O60502 916 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 CLSTN1O94985 981 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 CXCL8P10145 99 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 PIK3CAP42336 1068 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 POLR2FP61218 127 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 TFAMQ00059 246 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 WDR44Q5JSH3 913 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 KLHDC7AQ5VTJ3 777 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 NT5DC4Q86YG4 428 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 FMNL3Q8IVF7 1028 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 TC2NQ8N9U0 490 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 SPAG5Q96R06 1193 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 C11orf84Q9BUA3 381 aaPredicted RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 NAA15Q9BXJ9 866 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 EIF2AQ9BY44 585 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 IMPG2Q9BZV3 1241 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 TTYH3Q9C0H2 523 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 ELAC1Q9H777 363 aaKnown RBP16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 RAB20Q9NX57 234 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 FBXL5Q9UKA1 691 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 COQ4Q9Y3A0 265 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
TMEM39A-203ENST00000461654 RALGAPA2Q2PPJ7 1873 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 LACTBL1A8MY62 500 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 ZC3H11AO75152 810 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 SKIP12755 728 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 UCHL3P15374 230 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 CTNNB1P35222 781 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 RAB27AP51159 221 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 TFF2Q03403 129 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 TRPC3Q13507 836 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 ZACNQ401N2 412 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 TIGD5Q53EQ6 642 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 RRAGAQ7L523 313 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 ADAMTS19Q8TE59 1207 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 FAM81BQ96LP2 452 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 ZNF830Q96NB3 372 aaPredicted RBP16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 NT5C1BQ96P26 610 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 BAG1Q99933 345 aaPredicted RBP16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 APOL6Q9BWW8 343 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 GANQ9H2C0 597 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 NLRC4Q9NPP4 1024 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 ABHD10Q9NUJ1 306 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 SNTG2Q9NY99 539 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 APEX2Q9UBZ4 518 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 LRFN2Q9ULH4 789 aa16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 MRPL42Q9Y6G3 142 aaKnown RBP16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMEM39A-203ENST00000461654 C4BPAP04003 597 aaKnown RBP16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 SKILP12757 684 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 GOLGA8FQ08AF8 430 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 GOLGA8DPQ0D2H9 430 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 COL19A1Q14993 1142 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 TMEM132DQ14C87 1099 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 SLC10A6Q3KNW5 377 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 UBXN11Q5T124 520 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 C15orf39Q6ZRI6 1047 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 TAS1R2Q8TE23 839 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 ZNF516Q92618 1163 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 TMEM161AQ9NX61 479 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 PARP2Q9UGN5 583 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 MYO6Q9UM54 1294 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 DERAQ9Y315 318 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 IPPQ9Y573 584 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 PCDHB2Q9Y5E7 798 aa16.34■□□□□ 0.21
TMEM39A-203ENST00000461654 TNFRSF10AO00220 468 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 EPHB6O15197 1021 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 XPOTO43592 962 aaKnown RBP16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 NOL4O94818 638 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 HLA-DRAP01903 254 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 ITGA4P13612 1032 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 MFAP3P55082 362 aa16.33■□□□□ 0.2
TMEM39A-203ENST00000461654 WNT7BP56706 349 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms