RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 MKS1Q9NXB0 559 aa5.68□□□□□ -1.5
UBA3-204ENST00000461522 SAP30BPQ9UHR5 308 aaKnown RBP5.68□□□□□ -1.5
UBA3-204ENST00000461522 MTO1Q9Y2Z2 717 aaKnown RBP5.68□□□□□ -1.5
UBA3-204ENST00000461522 WIZO95785 1651 aa5.68□□□□□ -1.5
UBA3-204ENST00000461522 COL11A2P13942 1736 aaPredicted RBP5.68□□□□□ -1.5
UBA3-204ENST00000461522 FZD9O00144 591 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 PCDHGA12O60330 932 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 ERN1O75460 977 aaKnown RBP5.67□□□□□ -1.5
UBA3-204ENST00000461522 HAUS5O94927 633 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 FCER1AP12319 257 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 CDC42EP1Q00587 391 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 ZNF169Q14929 603 aaPredicted RBP5.67□□□□□ -1.5
UBA3-204ENST00000461522 CCDC142Q17RM4 750 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 SYDE2Q5VT97 1194 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 MIGA2Q7L4E1 593 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 LNX2Q8N448 690 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 TBC1D15Q8TC07 691 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 IFI44Q8TCB0 444 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 FAXDC2Q96IV6 333 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 CASS4Q9NQ75 786 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 TDP1Q9NUW8 608 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 IPPQ9Y573 584 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 PCDHGA9Q9Y5G4 932 aaKnown RBP5.67□□□□□ -1.5
UBA3-204ENST00000461522 PCDHGA8Q9Y5G5 932 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 PCDHGA7Q9Y5G6 932 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 PCDHGA6Q9Y5G7 932 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 PCDHGA3Q9Y5H0 932 aa5.67□□□□□ -1.5
UBA3-204ENST00000461522 CFTRP13569 1480 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 SGTAO43765 313 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 MT-CO1P00395 513 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 SLC16A1P53985 500 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 KRT85P78386 507 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 SIM1P81133 766 aaPredicted RBP5.66□□□□□ -1.5
UBA3-204ENST00000461522 GEN1Q17RS7 908 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 FBXO42Q6P3S6 717 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 RD3Q7Z3Z2 195 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 COLGALT2Q8IYK4 626 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 RAB24Q969Q5 203 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 HDAC10Q969S8 669 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 TMX3Q96JJ7 454 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 AIFM2Q9BRQ8 373 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 KCTD5Q9NXV2 234 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 FOXJ2Q9P0K8 574 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 TRHDEQ9UKU6 1024 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 PCDHA13Q9Y5I0 950 aa5.66□□□□□ -1.5
UBA3-204ENST00000461522 CCDC88BA6NC98 1476 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 KLHL33A6NCF5 533 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 GRM6O15303 877 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 HTRA2O43464 458 aaPredicted RBP5.65□□□□□ -1.5
UBA3-204ENST00000461522 EDNRBP24530 442 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 PTH2RP49190 550 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 MTMR1Q13613 665 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 ACAP2Q15057 778 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 PABPC1LQ4VXU2 614 aaKnown RBP5.65□□□□□ -1.5
UBA3-204ENST00000461522 SP5Q6BEB4 398 aaPredicted RBP5.65□□□□□ -1.5
UBA3-204ENST00000461522 SYCE2Q6PIF2 218 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 RSPH3Q86UC2 560 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 IL17RDQ8NFM7 739 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 CAGE1Q8TC20 777 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 PTCD3Q96EY7 689 aaKnown RBP5.65□□□□□ -1.5
UBA3-204ENST00000461522 TLK1Q9UKI8 766 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 LIMCH1Q9UPQ0 1083 aa5.65□□□□□ -1.5
UBA3-204ENST00000461522 A0A1W2PS29 197 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 MGST3O14880 152 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 SBK3P0C264 359 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 MTHFD1P11586 935 aaKnown RBP5.64□□□□□ -1.51
UBA3-204ENST00000461522 RARRES1P49788 294 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 CDKN1CP49918 316 aaPredicted RBP5.64□□□□□ -1.51
UBA3-204ENST00000461522 GUCY2FP51841 1108 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 C21orf58P58505 322 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 ABCB5Q2M3G0 1257 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 C3orf36Q3SXR2 165 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 ZNF362Q5T0B9 420 aaPredicted RBP5.64□□□□□ -1.51
UBA3-204ENST00000461522 RNF187Q5TA31 235 aaPredicted RBP5.64□□□□□ -1.51
UBA3-204ENST00000461522 SSH3Q8TE77 659 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 PDLIM2Q96JY6 352 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 MRGPRX4Q96LA9 322 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 DUSP26Q9BV47 211 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 TLR10Q9BXR5 811 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 VSX1Q9NZR4 365 aaPredicted RBP5.64□□□□□ -1.51
UBA3-204ENST00000461522 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.64□□□□□ -1.51
UBA3-204ENST00000461522 DMTF1Q9Y222 760 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 SBNO2Q9Y2G9 1366 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 PDS5BQ9NTI5 1447 aa5.64□□□□□ -1.51
UBA3-204ENST00000461522 MASP2O00187 686 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 GABRDO14764 452 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 AGFG2O95081 481 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 MYBL2P10244 700 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 CDK11BP21127 795 aaKnown RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 CD38P28907 300 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 ELLP55199 621 aaPredicted RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 ZNF280AP59817 542 aaPredicted RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 MRPS35P82673 323 aaKnown RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 MRPS21P82921 87 aaKnown RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 IL10RAQ13651 578 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 RAB39AQ14964 217 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 BOLLQ8N9W6 283 aaKnown RBP5.63□□□□□ -1.51
UBA3-204ENST00000461522 COA7Q96BR5 231 aa5.63□□□□□ -1.51
UBA3-204ENST00000461522 TEKT5Q96M29 485 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms