RNA–Protein interactions for RNA: ENST00000461217.1

COL16A1-206, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-206ENST00000461217 TUBGCP4Q9UGJ1 667 aa16.48■□□□□ 0.23
COL16A1-206ENST00000461217 FBXL5Q9UKA1 691 aa16.48■□□□□ 0.23
COL16A1-206ENST00000461217 INSL5Q9Y5Q6 135 aa16.48■□□□□ 0.23
COL16A1-206ENST00000461217 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 ARHGEF37A1IGU5 675 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 LRRN2O75325 713 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 CXCL8P10145 99 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 CEBPBP17676 345 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-206ENST00000461217 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 PRKCQQ04759 706 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 SPAG1Q07617 926 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 DHX8Q14562 1220 aaKnown RBP16.47■□□□□ 0.23
COL16A1-206ENST00000461217 ARL6IP4Q66PJ3 421 aaKnown RBP16.47■□□□□ 0.23
COL16A1-206ENST00000461217 PDZD4Q76G19 769 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-206ENST00000461217 TCEAL8Q8IYN2 117 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 APPL2Q8NEU8 664 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 DDX12PQ92771 950 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 SUSD3Q96L08 255 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 BCO2Q9BYV7 579 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 DLGAP2Q9P1A6 1054 aa16.47■□□□□ 0.23
COL16A1-206ENST00000461217 CITO14578 2027 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 COL4A3Q01955 1670 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 ZNF197O14709 1029 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 MEFVO15553 781 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-206ENST00000461217 ECI2O75521 394 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 SEC24AO95486 1093 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 LMNAP02545 664 aaKnown RBP16.46■□□□□ 0.23
COL16A1-206ENST00000461217 LIG4P49917 911 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 PPP2R3AQ06190 1150 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 MCL1Q07820 350 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 RESTQ13127 1097 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 TMEM119Q4V9L6 283 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 CYP4A22Q5TCH4 519 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 TPGS2Q68CL5 300 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 HAUS6Q7Z4H7 955 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 KIF12Q96FN5 646 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 SEMA4AQ9H3S1 761 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 SPATA6Q9NWH7 488 aaPredicted RBP16.46■□□□□ 0.23
COL16A1-206ENST00000461217 PCDHB8Q9UN66 801 aa16.46■□□□□ 0.23
COL16A1-206ENST00000461217 CACNA1HO95180 2353 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 DOCK6Q96HP0 2047 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 K7ENM7 598 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 TBC1D4O60343 1298 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 FAM13AO94988 1023 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 CLTAP09496 248 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 SP9P0CG40 484 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 GLULP15104 373 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 CD72P21854 359 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 UBA7P41226 1012 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 NCKAP1LP55160 1127 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 YWHAHQ04917 246 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 ADCY1Q08828 1119 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 MRPL58Q14197 206 aaKnown RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 ATL3Q6DD88 541 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 CLEC17AQ6ZS10 378 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 TPRG1Q6ZUI0 275 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 AK8Q96MA6 479 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 ZNF512Q96ME7 567 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 HINFPQ9BQA5 517 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 ZHX3Q9H4I2 956 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 PLEKHA5Q9HAU0 1116 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 AVENQ9NQS1 362 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 ODF2LQ9ULJ1 636 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 UBQLN1Q9UMX0 589 aaKnown RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 MYH11P35749 1972 aa16.45■□□□□ 0.22
COL16A1-206ENST00000461217 ZFHX2Q9C0A1 2572 aaPredicted RBP16.45■□□□□ 0.22
COL16A1-206ENST00000461217 PDCD11Q14690 1871 aaKnown RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 LAMTOR5O43504 91 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 XPOTO43592 962 aaKnown RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 MYL4P12829 197 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 TNFSF9P41273 254 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 TWF1Q12792 350 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 PRSS36Q5K4E3 855 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 TANGO2Q6ICL3 276 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 DSTYKQ6XUX3 929 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 USP37Q86T82 979 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 ELSPBP1Q96BH3 223 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 TCEAL4Q96EI5 215 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 FAM212AQ96EL1 285 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 ZNF396Q96N95 335 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 DDX23Q9BUQ8 820 aaKnown RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 PLA2G2FQ9BZM2 168 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 ZFP14Q9HCL3 533 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 LTB4R2Q9NPC1 389 aa16.44■□□□□ 0.22
COL16A1-206ENST00000461217 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 MTF2Q9Y483 593 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 TIMM13Q9Y5L4 95 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.44■□□□□ 0.22
COL16A1-206ENST00000461217 MIA3Q5JRA6 1907 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms