RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 SPATA1Q5VX52 437 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 CRELD2Q6UXH1 353 aaPredicted RBP24.42■■□□□ 1.5
TRAF4-207ENST00000461195 KREMEN2Q8NCW0 462 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 GLIS3Q8NEA6 775 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 BEST2Q8NFU1 509 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 SUSD3Q96L08 255 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 HPSEQ9Y251 543 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 NR2E1Q9Y466 385 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 BACE2Q9Y5Z0 518 aa24.42■■□□□ 1.5
TRAF4-207ENST00000461195 CCDC195A0A1B0GUA6 201 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 PVALEFA0A1B0GWK0 134 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 EIF3DO15371 548 aaKnown RBP eCLIP24.41■■□□□ 1.5
TRAF4-207ENST00000461195 ADAM12O43184 909 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 ACTN4O43707 911 aaKnown RBP24.41■■□□□ 1.5
TRAF4-207ENST00000461195 LDHAP00338 332 aaKnown RBP24.41■■□□□ 1.5
TRAF4-207ENST00000461195 NFICP08651 508 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 ALADP13716 330 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 CUL4BQ13620 913 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 VARS2Q5ST30 1063 aaKnown RBP24.41■■□□□ 1.5
TRAF4-207ENST00000461195 CYP26C1Q6V0L0 522 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 RNF135Q8IUD6 432 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 TMEM130Q8N3G9 435 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 FAM213AQ9BRX8 229 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 C2CD2Q9Y426 696 aa24.41■■□□□ 1.5
TRAF4-207ENST00000461195 IL18RAPO95256 599 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 OR1D2P34982 312 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 GUCY2FP51841 1108 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 EHHADHQ08426 723 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 RAB33AQ14088 237 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 ARMCX5Q6P1M9 558 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 EPM2AIP1Q7L775 607 aaPredicted RBP24.4■■□□□ 1.5
TRAF4-207ENST00000461195 GRAMD1CQ8IYS0 662 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 FEZF2Q8TBJ5 459 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 SAAL1Q96ER3 474 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 PAGE5Q96GU1 130 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 RHOBTB2Q9BYZ6 727 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 TSHZ2Q9NRE2 1034 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 ZDHHC7Q9NXF8 308 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 FBXW11Q9UKB1 542 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 CDY1Q9Y6F8 540 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 DENND4AQ7Z401 1863 aa24.4■■□□□ 1.5
TRAF4-207ENST00000461195 DCXO43602 365 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 RFPL2O75678 378 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 SP100P23497 879 aaPredicted RBP24.39■■□□□ 1.49
TRAF4-207ENST00000461195 SYKP43405 635 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 RSPO2Q6UXX9 243 aaPredicted RBP24.39■■□□□ 1.49
TRAF4-207ENST00000461195 APPL2Q8NEU8 664 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 ZNF507Q8TCN5 953 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 CBWD1Q9BRT8 395 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 PCDHB8Q9UN66 801 aa24.39■■□□□ 1.49
TRAF4-207ENST00000461195 UBE4BO95155 1302 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 FAM237AA0A1B0GTK4 181 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 A0A1W2PQ27 194 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 A0A1W2PQ64 194 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 A0A1W2PQD8 194 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 H7C4K7 107 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 KIAA0391O15091 583 aaKnown RBP24.38■■□□□ 1.49
TRAF4-207ENST00000461195 EXTL3O43909 919 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 PAPLNO95428 1278 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 LIN9Q5TKA1 542 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 PCIF1Q9H4Z3 704 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 GDPD2Q9HCC8 539 aa24.38■■□□□ 1.49
TRAF4-207ENST00000461195 M0QZQ0 153 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 ZMYND10O75800 440 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 HOXD13P35453 343 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 AARSP49588 968 aaKnown RBP eCLIP24.37■■□□□ 1.49
TRAF4-207ENST00000461195 NDUFA8P51970 172 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 MRPL58Q14197 206 aaKnown RBP24.37■■□□□ 1.49
TRAF4-207ENST00000461195 C9orf57Q5W0N0 161 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 SLC8B1Q6J4K2 584 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 CCDC149Q6ZUS6 474 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 NT5DC4Q86YG4 428 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 BRSK2Q8IWQ3 736 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 FSIP1Q8NA03 581 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 ZSWIM2Q8NEG5 633 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 SMG7Q92540 1137 aaKnown RBP24.37■■□□□ 1.49
TRAF4-207ENST00000461195 RBAKQ9NYW8 714 aaPredicted RBP24.37■■□□□ 1.49
TRAF4-207ENST00000461195 MUTYHQ9UIF7 546 aa24.37■■□□□ 1.49
TRAF4-207ENST00000461195 PIEZO1Q92508 2521 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 GOLGA8IPA6NC78 632 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 GOLGA8JA6NMD2 632 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 PRR33A8MZF0 331 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 MYL1P05976 194 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 PAX3P23760 479 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 DSTYKQ6XUX3 929 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 EFCAB13Q8IY85 973 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 GPD1LQ8N335 351 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 NOC3LQ8WTT2 800 aaKnown RBP24.36■■□□□ 1.49
TRAF4-207ENST00000461195 SCFD1Q8WVM8 642 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 ZNF707Q96C28 371 aaPredicted RBP24.36■■□□□ 1.49
TRAF4-207ENST00000461195 PRKD2Q9BZL6 878 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 PIDD1Q9HB75 910 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 SLC39A2Q9NP94 309 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 DPP3Q9NY33 737 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 USTQ9Y2C2 406 aa24.36■■□□□ 1.49
TRAF4-207ENST00000461195 ANO9A1A5B4 782 aa24.35■■□□□ 1.49
TRAF4-207ENST00000461195 C2CD4DB7Z1M9 353 aa24.35■■□□□ 1.49
TRAF4-207ENST00000461195 TULP1O00294 542 aaPredicted RBP24.35■■□□□ 1.49
TRAF4-207ENST00000461195 PIRO00625 290 aa24.35■■□□□ 1.49
TRAF4-207ENST00000461195 PPEF2O14830 753 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms