RNA–Protein interactions for RNA: ENST00000461171.1

CD40-203, Transcript of CD40 molecule, humanhuman

TSL 3

Gene CD40, Length 710 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-203ENST00000461171 RASSF8Q8NHQ8 419 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 FGF13Q92913 245 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 BICD1Q96G01 975 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 USP28Q96RU2 1077 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 PHOX2BQ99453 314 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
CD40-203ENST00000461171 HCFC1R1Q9NWW0 138 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 DNMT3BQ9UBC3 853 aaKnown RBP10.52□□□□□ -0.73
CD40-203ENST00000461171 WNT16Q9UBV4 365 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 CPSF3Q9UKF6 684 aaKnown RBP10.52□□□□□ -0.73
CD40-203ENST00000461171 KCNH3Q9ULD8 1083 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 UBQLN1Q9UMX0 589 aaKnown RBP10.52□□□□□ -0.73
CD40-203ENST00000461171 NUB1Q9Y5A7 615 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 STYXL1Q9Y6J8 313 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 NUMBLQ9Y6R0 609 aa10.52□□□□□ -0.73
CD40-203ENST00000461171 ANK1P16157 1881 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 PTPRZ1P23471 2315 aaPredicted RBP10.51□□□□□ -0.73
CD40-203ENST00000461171 KRBA1A5PL33 1030 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 LACTBL1A8MY62 500 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 TISP43B9A030 160 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 H7C4K7 107 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 M0QZQ0 153 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 KRT18P05783 430 aaKnown RBP10.51□□□□□ -0.73
CD40-203ENST00000461171 ATF2P15336 505 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 AOC1P19801 751 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 NMT1P30419 496 aaKnown RBP10.51□□□□□ -0.73
CD40-203ENST00000461171 ABCD1P33897 745 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 MCM4P33991 863 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 SPAG1Q07617 926 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 SLC39A14Q15043 492 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 ZC2HC1CQ53FD0 456 aaPredicted RBP10.51□□□□□ -0.73
CD40-203ENST00000461171 TPGS2Q68CL5 300 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 ZNF280DQ6N043 979 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 ALYREFQ86V81 257 aaKnown RBP10.51□□□□□ -0.73
CD40-203ENST00000461171 SFR1Q86XK3 245 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 SIX5Q8N196 739 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 ITFG1Q8TB96 612 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 DDX12PQ92771 950 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 FGF14Q92915 247 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 DNAJC19Q96DA6 116 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 TSPAN18Q96SJ8 248 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 MSTO1Q9BUK6 570 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 STRA6Q9BX79 667 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 SLC2A4RGQ9NR83 387 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 POLIQ9UNA4 740 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 TSC2P49815 1807 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 WDR87Q6ZQQ6 2873 aa10.51□□□□□ -0.73
CD40-203ENST00000461171 MYH15Q9Y2K3 1946 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 F5P12259 2224 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 FRMD3A2A2Y4 597 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 MYMKA6NI61 221 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 ANKRD63C9JTQ0 380 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 PPEF2O14830 753 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 STX6O43752 255 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 OAZ2O95190 189 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 SEC24AO95486 1093 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 CFHP08603 1231 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 NFICP08651 508 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.73
CD40-203ENST00000461171 NASPP49321 788 aaPredicted RBP10.5□□□□□ -0.73
CD40-203ENST00000461171 GUCY2FP51841 1108 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 SLC5A9Q2M3M2 681 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 CTXN3Q4LDR2 81 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 PABPC1LQ4VXU2 614 aaKnown RBP10.5□□□□□ -0.73
CD40-203ENST00000461171 SPATA1Q5VX52 437 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 PARM1Q6UWI2 310 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 ZNF720Q7Z2F6 126 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 CD302Q8IX05 232 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 KRI1Q8N9T8 703 aaKnown RBP10.5□□□□□ -0.73
CD40-203ENST00000461171 APPL2Q8NEU8 664 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 BEST2Q8NFU1 509 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 GPR152Q8TDT2 470 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 HVCN1Q96D96 273 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 KIF12Q96FN5 646 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 RPP25Q9BUL9 199 aaKnown RBP10.5□□□□□ -0.73
CD40-203ENST00000461171 MFSD1Q9H3U5 465 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 ZHX3Q9H4I2 956 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 SEL1LQ9UBV2 794 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 CCDC39Q9UFE4 941 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 FBXL21Q9UKT6 434 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 MAFFQ9ULX9 164 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 INSL5Q9Y5Q6 135 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 EP300Q09472 2414 aaPredicted RBP10.5□□□□□ -0.73
CD40-203ENST00000461171 SPTBN4Q9H254 2564 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 USP34Q70CQ2 3546 aa10.5□□□□□ -0.73
CD40-203ENST00000461171 ZNF292O60281 2723 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 A0A087X0B3 334 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 XPOTO43592 962 aaKnown RBP10.49□□□□□ -0.73
CD40-203ENST00000461171 PI15O43692 258 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 VNN2O95498 520 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 RHOP08100 348 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 GAP43P17677 238 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 ADSSP30520 456 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 TXLNAP40222 546 aa10.49□□□□□ -0.73
CD40-203ENST00000461171 POU5F1Q01860 360 aaKnown RBP10.49□□□□□ -0.73
CD40-203ENST00000461171 CEBPZQ03701 1054 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms