RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ZNF169Q14929 603 aaPredicted RBP4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 NOMO1Q15155 1222 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 ABCB5Q2M3G0 1257 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 GPR149Q86SP6 731 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 GLCCI1Q86VQ1 547 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 COLGALT2Q8IYK4 626 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 PPM1NQ8N819 430 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 SLC35B2Q8TB61 432 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 ACTRT2Q8TDY3 377 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 SLC2A13Q96QE2 648 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 SMAD5Q99717 465 aaKnown RBP4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 SENP6Q9GZR1 1112 aaPredicted RBP4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 CCDC8Q9H0W5 538 aaPredicted RBP4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 PRDM13Q9H4Q3 707 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 KLHL11Q9NVR0 708 aa4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 THRAP3Q9Y2W1 955 aaKnown RBP4.6□□□□□ -1.67
SPTLC1-203ENST00000461132 E2F8A0AVK6 867 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 GOLGA6CA6NDK9 693 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 GOLGA6BA6NDN3 693 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 INO80B-WBP1J3KQ70 363 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 ADCY6O43306 1168 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 TSPAN6O43657 245 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 GOLGA6DP0CG33 693 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 IL2RBP14784 551 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 CCND1P24385 295 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 GNALP38405 381 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 MTNR1BP49286 362 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SIM1P81133 766 aaPredicted RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SP140Q13342 867 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 UBE4AQ14139 1066 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 NFE2Q16621 373 aaPredicted RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 MST1LQ2TV78 715 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 ZNF362Q5T0B9 420 aaPredicted RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 PNMA8AQ86V59 439 aaPredicted RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 REPS2Q8NFH8 660 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SSH1Q8WYL5 1049 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 PTCD3Q96EY7 689 aaKnown RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 NEU1Q99519 415 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 ZSWIM1Q9BR11 485 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SLC29A3Q9BZD2 475 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 INO80BQ9C086 356 aaPredicted RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 DMRT3Q9NQL9 472 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 GOLGA6AQ9NYA3 693 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SLC17A6Q9P2U8 582 aa4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SAP30BPQ9UHR5 308 aaKnown RBP4.59□□□□□ -1.67
SPTLC1-203ENST00000461132 SHTN1A0MZ66 631 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 KLHL33A6NCF5 533 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 TRIM75PA6NK02 468 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 AGXTP21549 392 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 MCAMP43121 646 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 RARRES1P49788 294 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 CACNA2D1P54289 1103 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 CXADRP78310 365 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 PTPN21Q16825 1174 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 METRNLQ641Q3 311 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 ZNF572Q7Z3I7 529 aaPredicted RBP4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 CHPFQ8IZ52 775 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 TRMT2AQ8IZ69 625 aaKnown RBP4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 MYO1HQ8N1T3 1032 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 PQLC1Q8N2U9 271 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 C1orf162Q8NEQ5 155 aaPredicted RBP4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 FBXO18Q8NFZ0 1043 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 OR7D4Q8NG98 312 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 SMG7Q92540 1137 aaKnown RBP4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 BOD1Q96IK1 185 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 FAXDC2Q96IV6 333 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 AIFM2Q9BRQ8 373 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 MRI1Q9BV20 369 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 BCO1Q9HAY6 547 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 LANCL2Q9NS86 450 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 TMEM140Q9NV12 185 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 KCNE5Q9UJ90 142 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 FRMD4BQ9Y2L6 1034 aa4.58□□□□□ -1.68
SPTLC1-203ENST00000461132 WASHC2CQ9Y4E1 1318 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 FAM171A2A8MVW0 826 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 TEX33O43247 280 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 PEX1O43933 1283 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 ENDOD1O94919 500 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 ELANEP08246 267 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 ALAS1P13196 640 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 FGFR4P22455 802 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 NEK2P51955 445 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 SLC16A1P53985 500 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 HSD11B2P80365 405 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 OCA2Q04671 838 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 LONRF3Q496Y0 759 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 HSP90AB4PQ58FF6 505 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 AFMIDQ63HM1 303 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 B3GNTL1Q67FW5 361 aaPredicted RBP4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 TSHZ1Q6ZSZ6 1077 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 ZBTB46Q86UZ6 589 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 CBARPQ8N350 705 aaPredicted RBP4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 FAM98AQ8NCA5 519 aaKnown RBP4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 TSR2Q969E8 191 aaKnown RBP4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 UBA5Q9GZZ9 404 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 SEMA4GQ9NTN9 838 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 SCOCQ9UIL1 159 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 INTUQ9ULD6 942 aa4.57□□□□□ -1.68
SPTLC1-203ENST00000461132 COL11A2P13942 1736 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms