RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 BRCC3P46736 316 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 SURF1Q15526 300 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 LIN9Q5TKA1 542 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 TMC5Q6UXY8 1006 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 GPD1LQ8N335 351 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 C12orf76Q8N812 135 aaPredicted RBP25.12■■□□□ 1.61
CBX3-204ENST00000456948 C3orf58Q8NDZ4 430 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 CMASQ8NFW8 434 aaPredicted RBP25.12■■□□□ 1.61
CBX3-204ENST00000456948 GOLGA5Q8TBA6 731 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 KHSRPQ92945 711 aaKnown RBP eCLIP25.12■■□□□ 1.617e-9■■■□□ 14.6
CBX3-204ENST00000456948 HPS3Q969F9 1004 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 CLSTN3Q9BQT9 956 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 C1QTNF1Q9BXJ1 281 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 OXCT2Q9BYC2 517 aaPredicted RBP25.12■■□□□ 1.61
CBX3-204ENST00000456948 GDPD2Q9HCC8 539 aa25.12■■□□□ 1.61
CBX3-204ENST00000456948 R3HCC1Q9Y3T6 440 aaKnown RBP25.12■■□□□ 1.61
CBX3-204ENST00000456948 PDCD11Q14690 1871 aaKnown RBP25.11■■□□□ 1.61
CBX3-204ENST00000456948 C19orf67A6NJJ6 358 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 I3L4J1 428 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 KIF20AO95235 890 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 TKTP29401 623 aaKnown RBP25.11■■□□□ 1.61
CBX3-204ENST00000456948 CD300LGQ6UXG3 332 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 DSTYKQ6XUX3 929 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 RTL10Q7L3V2 364 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 EPM2AIP1Q7L775 607 aaPredicted RBP25.11■■□□□ 1.61
CBX3-204ENST00000456948 USP37Q86T82 979 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 KREMEN2Q8NCW0 462 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 SAAL1Q96ER3 474 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 RPGRIP1Q96KN7 1286 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 FGFBP2Q9BYJ0 223 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 PCIF1Q9H4Z3 704 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 SLC39A2Q9NP94 309 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 RBAKQ9NYW8 714 aaPredicted RBP25.11■■□□□ 1.61
CBX3-204ENST00000456948 MTRRQ9UBK8 725 aa25.11■■□□□ 1.61
CBX3-204ENST00000456948 ZNF233A6NK53 670 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 ALADP13716 330 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 CASP1P29466 404 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 OR1D2P34982 312 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 EHHADHQ08426 723 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 RAB33AQ14088 237 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 VARS2Q5ST30 1063 aaKnown RBP25.1■■□□□ 1.61
CBX3-204ENST00000456948 GPR149Q86SP6 731 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 BRSK2Q8IWQ3 736 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 GRAMD1CQ8IYS0 662 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 CBWD1Q9BRT8 395 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 IKZF4Q9H2S9 585 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 PIDD1Q9HB75 910 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 ZDHHC7Q9NXF8 308 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 DPP3Q9NY33 737 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 PCDHB8Q9UN66 801 aa25.1■■□□□ 1.61
CBX3-204ENST00000456948 CCDC195A0A1B0GUA6 201 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 ZNF202O95125 648 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 NFICP08651 508 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 SPATA31D3P0C874 917 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 ZNF280DQ6N043 979 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 LILRA6Q6PI73 481 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 CRELD2Q6UXH1 353 aaPredicted RBP25.09■■□□□ 1.61
CBX3-204ENST00000456948 KRBA2Q6ZNG9 492 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 SPATA31D4Q6ZUB0 917 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 RHOBTB2Q9BYZ6 727 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 HOOK1Q9UJC3 728 aaKnown RBP25.09■■□□□ 1.61
CBX3-204ENST00000456948 CDY1Q9Y6F8 540 aa25.09■■□□□ 1.61
CBX3-204ENST00000456948 ELF1P32519 619 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 KNOP1Q1ED39 458 aaKnown RBP25.08■■□□□ 1.61
CBX3-204ENST00000456948 BMT2Q1RMZ1 405 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 UVSSAQ2YD98 709 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 C9orf57Q5W0N0 161 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 NELFCDQ8IXH7 590 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 SCFD1Q8WVM8 642 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 HSPBP1Q9NZL4 362 aa25.08■■□□□ 1.61
CBX3-204ENST00000456948 C5orf42Q9H799 3197 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 GOLGA8IPA6NC78 632 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 GOLGA8JA6NMD2 632 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 RPN1P04843 607 aaKnown RBP25.07■■□□□ 1.6
CBX3-204ENST00000456948 ODC1P11926 461 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 TFAMQ00059 246 aaKnown RBP25.07■■□□□ 1.6
CBX3-204ENST00000456948 YWHAHQ04917 246 aaPredicted RBP25.07■■□□□ 1.6
CBX3-204ENST00000456948 KMT5BQ4FZB7 885 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 CTXN3Q4LDR2 81 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 CCDC149Q6ZUS6 474 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 GLIS3Q8NEA6 775 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 ACSF2Q96CM8 615 aaPredicted RBP25.07■■□□□ 1.6
CBX3-204ENST00000456948 TSHZ2Q9NRE2 1034 aa25.07■■□□□ 1.6
CBX3-204ENST00000456948 MTCL1Q9Y4B5 1905 aaKnown RBP25.07■■□□□ 1.6
CBX3-204ENST00000456948 LOC730098B7Z3J9 87 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 M0QZQ0 153 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 PIRO00625 290 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 ZMYND10O75800 440 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 HNRNPA1P09651 372 aaKnown RBP eCLIP25.06■■□□□ 1.6
CBX3-204ENST00000456948 IGFBP6P24592 240 aaPredicted RBP25.06■■□□□ 1.6
CBX3-204ENST00000456948 PNPLA4P41247 253 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 LILRA4P59901 499 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 PPM1LQ5SGD2 360 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 PLCD3Q8N3E9 789 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 ZNF461Q8TAF7 563 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 SMG7Q92540 1137 aaKnown RBP25.06■■□□□ 1.6
CBX3-204ENST00000456948 ZNF560Q96MR9 790 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 AGPAT3Q9NRZ7 376 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 FBXW11Q9UKB1 542 aa25.06■■□□□ 1.6
CBX3-204ENST00000456948 DSEQ9UL01 958 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms