RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RNF11Q9Y3C5 154 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TIMM22Q9Y584 194 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ARFGEF1Q9Y6D6 1849 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SPAG17Q6Q759 2223 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 A0A0G2JS52 829 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DENND3A2RUS2 1198 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC169A6NNP5 214 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CAPN14A8MX76 684 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC188H7C350 402 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 MAGEB2O15479 319 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CLSTN1O94985 981 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 NR2F2P24468 414 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ALDH3A1P30838 453 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 NOP14P78316 857 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 HPCAP84074 193 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 MYBPC1Q00872 1141 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 MAP3K10Q02779 954 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 UBE2SQ16763 222 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SUSD4Q5VX71 490 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TTBK2Q6IQ55 1244 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CHST15Q7LFX5 561 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DAW1Q8N136 415 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PSD4Q8NDX1 1056 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 LARP4BQ92615 738 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF512BQ96KM6 892 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM47Q9BQJ4 181 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 HEMGNQ9BXL5 484 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TANGO6Q9C0B7 1094 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PRDM16Q9HAZ2 1276 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ACSS2Q9NR19 701 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CCDC87Q9NVE4 849 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SRP68Q9UHB9 627 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CDC14AQ9UNH5 594 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TMEM98Q9Y2Y6 226 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PCDHB13Q9Y5F0 798 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TRIP11Q15643 1979 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 H3BNX3 289 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 EML1O00423 815 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PEX1O43933 1283 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DNAJA2O60884 412 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZMPSTE24O75844 475 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM155BO75949 473 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PSMG1O95456 288 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ATP6V1B1P15313 513 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 VCLP18206 1134 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 MARSP56192 900 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 KLF1Q13351 362 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PDK1Q15118 436 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TSR1Q2NL82 804 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 COBLL1Q53SF7 1204 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 XKR5Q6UX68 686 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 UTS2BQ765I0 119 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DGKHQ86XP1 1220 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZC3H3Q8IXZ2 948 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 RDH13Q8NBN7 331 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 LRRN4Q8WUT4 740 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 DHX38Q92620 1227 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 NSUN4Q96CB9 384 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM84BQ96KN1 310 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PCDHA4Q9UN74 947 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 STX8Q9UNK0 236 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 COL22A1Q8NFW1 1626 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SLIT3O75094 1523 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF638Q14966 1978 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 FRMPD4Q14CM0 1322 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CYP3A7-CYP3A51PA0A087WV96 503 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L15C9J2P7 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L13C9JLJ4 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L11C9JVI0 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L18D6R9N7 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L22D6RA61 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L17D6RBQ6 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L19D6RCP7 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L20D6RJB6 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CCNT1O60563 726 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 FLOT1O75955 427 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 C6orf222P0C671 652 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CTNNA2P26232 953 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 USP17L24Q0WX57 530 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 CBX3Q13185 183 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 EML3Q32P44 896 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SMUG1Q53HV7 270 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 FAM26FQ5R3K3 315 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SYCP2LQ5T4T6 812 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SPTY2D1Q68D10 685 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 KCNT2Q6UVM3 1135 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SGCDQ92629 289 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 ZNF75CPQ92670 426 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 SKA1Q96BD8 255 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 RPL10LQ96L21 214 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 KREMEN1Q96MU8 473 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 PPP1R10Q96QC0 940 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 NAA50Q9GZZ1 169 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 NT5C3AQ9H0P0 336 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 GPRC5CQ9NQ84 441 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 BARHL2Q9NY43 387 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 MARCOQ9UEW3 520 aaPredicted RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 URB1O60287 2271 aaKnown RBP4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 TIAM2Q8IVF5 1701 aa4.82□□□□□ -1.64
DEPDC1-202ENST00000456315 A0A088AWK7 358 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms