RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 PSTPIP1O43586 416 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 USP2O75604 605 aaPredicted RBP21.38■■□□□ 1.01
CSPG5-203ENST00000456150 ATP4AP20648 1035 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 SP2Q02086 613 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 DRP2Q13474 957 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 PTK6Q13882 451 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 C6orf89Q6UWU4 347 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 CHST13Q8NET6 341 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.38■■□□□ 1.01
CSPG5-203ENST00000456150 DDX27Q96GQ7 796 aaKnown RBP21.38■■□□□ 1.01
CSPG5-203ENST00000456150 SNF8Q96H20 258 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 NIFKQ9BYG3 293 aaKnown RBP21.38■■□□□ 1.01
CSPG5-203ENST00000456150 TRIM7Q9C029 511 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 SCINQ9Y6U3 715 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 FSBPO95073 299 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 GNA15P30679 374 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 RFC5P40937 340 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 WNT7BP56706 349 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 CAV1Q03135 178 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 SPOPLQ6IQ16 392 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 ABRAQ8N0Z2 381 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 SELENOSQ9BQE4 189 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 TMEM134Q9H6X4 195 aa21.38■■□□□ 1.01
CSPG5-203ENST00000456150 DDX20Q9UHI6 824 aaKnown RBP21.38■■□□□ 1.01
CSPG5-203ENST00000456150 PTPRJQ12913 1337 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 RASGRF2O14827 1237 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 CLTAP09496 248 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 NOMO3P69849 1222 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 IFT88Q13099 833 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 SNX1Q13596 522 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 RNF187Q5TA31 235 aaPredicted RBP21.37■■□□□ 1.01
CSPG5-203ENST00000456150 USP50Q70EL3 339 aaPredicted RBP21.37■■□□□ 1.01
CSPG5-203ENST00000456150 CCDC25Q86WR0 208 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 RHOT1Q8IXI2 618 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 DCLK3Q9C098 648 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 HAPLN2Q9GZV7 340 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 ADAM22Q9P0K1 906 aa21.37■■□□□ 1.01
CSPG5-203ENST00000456150 A0A0B4J269 797 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 SMIM23A6NLE4 172 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CHN1P15882 459 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 EAPPQ56P03 285 aaPredicted RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 MFSD5Q6N075 450 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 TMEM270Q6UE05 265 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 TAOK1Q7L7X3 1001 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CPLX4Q7Z7G2 160 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 PHF13Q86YI8 300 aaPredicted RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CACNA2D3Q8IZS8 1091 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CHMP6Q96FZ7 201 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 ZBTB45Q96K62 511 aaPredicted RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 APOBEC3GQ9HC16 384 aaKnown RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CHST7Q9NS84 486 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 ANKFY1Q9P2R3 1169 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CNTN6Q9UQ52 1028 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 NOP14P78316 857 aaKnown RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 PPARDQ03181 441 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 NOL9Q5SY16 702 aaKnown RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 GKAP1Q5VSY0 366 aaPredicted RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 CCDC50Q8IVM0 306 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 RBBP8NLQ8NC74 664 aaPredicted RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 ATL2Q8NHH9 583 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 MDM1Q8TC05 714 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 C11orf70Q9BRQ4 267 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 TARS2Q9BW92 718 aaKnown RBP21.36■■□□□ 1.01
CSPG5-203ENST00000456150 UMODL1Q5DID0 1318 aa21.36■■□□□ 1.01
CSPG5-203ENST00000456150 IGKV6D-21A0A0A0MT36 114 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 C1QBPQ07021 282 aaKnown RBP21.35■■□□□ 1.01
CSPG5-203ENST00000456150 LLGL1Q15334 1064 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 QPCTQ16769 361 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 ZNF568Q3ZCX4 644 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 TNFAIP8L3Q5GJ75 292 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 RHBDF2Q6PJF5 856 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 CCDC121Q6ZUS5 278 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 PHLDB2Q86SQ0 1253 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 ANKRD35Q8N283 1001 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 EPS8L3Q8TE67 593 aaKnown RBP21.35■■□□□ 1.01
CSPG5-203ENST00000456150 ZNF526Q8TF50 670 aaPredicted RBP21.35■■□□□ 1.01
CSPG5-203ENST00000456150 SEC16BQ96JE7 1060 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 CABS1Q96KC9 395 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 IMPG2Q9BZV3 1241 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 CDC42EP4Q9H3Q1 356 aaKnown RBP21.35■■□□□ 1.01
CSPG5-203ENST00000456150 NRBP2Q9NSY0 501 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 FBXO40Q9UH90 709 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 ADGRA2Q96PE1 1338 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 ATF2P15336 505 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 AP3M2P53677 418 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 PLEKHA7Q6IQ23 1121 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 SEPT14Q6ZU15 432 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 KATNAL2Q8IYT4 538 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 UHMK1Q8TAS1 419 aaKnown RBP21.35■■□□□ 1.01
CSPG5-203ENST00000456150 ATG4AQ8WYN0 398 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 AFG3L2Q9Y4W6 797 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 CAPN7Q9Y6W3 813 aa21.35■■□□□ 1.01
CSPG5-203ENST00000456150 THAP12O43422 761 aa21.34■■□□□ 1.01
CSPG5-203ENST00000456150 DRD4P21917 467 aa21.34■■□□□ 1.01
CSPG5-203ENST00000456150 IFI35P80217 286 aaPredicted RBP21.34■■□□□ 1.01
CSPG5-203ENST00000456150 MAMLD1Q13495 774 aa21.34■■□□□ 1.01
CSPG5-203ENST00000456150 AUHQ13825 339 aaKnown RBP21.34■■□□□ 1.01
CSPG5-203ENST00000456150 PASD1Q8IV76 773 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms