RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 ZNF572Q7Z3I7 529 aaPredicted RBP14.58□□□□□ -0.08
CLK3-203ENST00000454830 PPTC7Q8NI37 304 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
CLK3-203ENST00000454830 ADPGKQ9BRR6 497 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 TRIM51Q9BSJ1 452 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 ABHD16BQ9H3Z7 469 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 SYNCQ9H7C4 482 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 UTP11Q9Y3A2 253 aaKnown RBP14.58□□□□□ -0.08
CLK3-203ENST00000454830 ARID2Q68CP9 1835 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 CCDC188H7C350 402 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 STAG3L1P0CL83 205 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 CYP2C19P33261 490 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 GRIK4Q16099 956 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 DGKDQ16760 1214 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 SGSM1Q2NKQ1 1148 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 NPLOC4Q8TAT6 608 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 ZSWIM1Q9BR11 485 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 NIF3L1Q9GZT8 377 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 POLIQ9UNA4 740 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 PTPN22Q9Y2R2 807 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 ADGRA2Q96PE1 1338 aa14.58□□□□□ -0.08
CLK3-203ENST00000454830 GPR25O00155 361 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 DDX3YO15523 660 aaKnown RBP14.57□□□□□ -0.08
CLK3-203ENST00000454830 MBTD1Q05BQ5 628 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 DNAJC21Q5F1R6 531 aaKnown RBP14.57□□□□□ -0.08
CLK3-203ENST00000454830 ZNF667Q5HYK9 610 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CFAP58Q5T655 872 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 MCOLN2Q8IZK6 566 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 DDX1Q92499 740 aaKnown RBP14.57□□□□□ -0.08
CLK3-203ENST00000454830 CCDC113Q9H0I3 377 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CARD9Q9H257 536 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CISHQ9NSE2 258 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 RNF19AQ9NV58 838 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 UVRAGQ9P2Y5 699 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
CLK3-203ENST00000454830 IGKV6-21A0A0C4DH24 114 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 DAPK3O43293 454 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 FAM153BP0C7A2 387 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 IQCF3P0C7M6 154 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 IRX5P78411 483 aaPredicted RBP14.57□□□□□ -0.08
CLK3-203ENST00000454830 PPARDQ03181 441 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 MCL1Q07820 350 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 TERF2Q15554 542 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 FAM153CQ494X1 144 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 DCAF12L1Q5VU92 463 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CDCA2Q69YH5 1023 aaPredicted RBP14.57□□□□□ -0.08
CLK3-203ENST00000454830 DCUN1D2Q6PH85 259 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 FAM153AQ9UHL3 310 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CEP83Q9Y592 693 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 ITGB3P05106 788 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 NFICP08651 508 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 AP3M2P53677 418 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CDH8P55286 799 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 FAM110CQ1W6H9 321 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 EFCAB13Q8IY85 973 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 CCDC105Q8IYK2 499 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 FAM53CQ9NYF3 392 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 PAPPA2Q9BXP8 1791 aa14.57□□□□□ -0.08
CLK3-203ENST00000454830 SNX1Q13596 522 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 EMBQ6PCB8 327 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 CATSPER4Q7RTX7 472 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 AENQ8WTP8 325 aaKnown RBP14.56□□□□□ -0.08
CLK3-203ENST00000454830 ZNF606Q8WXB4 792 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 TRIM6Q9C030 488 aaPredicted RBP14.56□□□□□ -0.08
CLK3-203ENST00000454830 FZD8Q9H461 694 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 MTUS1Q9ULD2 1270 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 ZC3H4Q9UPT8 1303 aaKnown RBP14.56□□□□□ -0.08
CLK3-203ENST00000454830 LACTBL1A8MY62 500 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 GOLGA8SH3BPF8 625 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 RNF40O75150 1001 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 ASS1P00966 412 aaKnown RBP14.56□□□□□ -0.08
CLK3-203ENST00000454830 RWDD2BP57060 319 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 C11orf63Q6NUN7 778 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 TSHZ1Q6ZSZ6 1077 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 ABRAQ8N0Z2 381 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
CLK3-203ENST00000454830 PLVAPQ9BX97 442 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 WNT8AQ9H1J5 351 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 CES2O00748 559 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 MYL3P08590 195 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 PYGMP11217 842 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 FKBP1BP68106 108 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 DR1Q01658 176 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 DUSP28Q4G0W2 176 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 MTHFD1LQ6UB35 978 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 MORC4Q8TE76 937 aa14.56□□□□□ -0.08
CLK3-203ENST00000454830 CALR3Q96L12 384 aaKnown RBP14.56□□□□□ -0.08
CLK3-203ENST00000454830 CYP1A2P05177 515 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
CLK3-203ENST00000454830 CLDN10P78369 228 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 ZNF677Q86XU0 584 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 TRIM11Q96F44 468 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 HEMGNQ9BXL5 484 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 MORF4L1Q9UBU8 362 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 KAT6AQ92794 2004 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 TLR3O15455 904 aaKnown RBP14.55□□□□□ -0.08
CLK3-203ENST00000454830 MMP3P08254 477 aa14.55□□□□□ -0.08
CLK3-203ENST00000454830 ACO1P21399 889 aaKnown RBP14.55□□□□□ -0.08
CLK3-203ENST00000454830 JADE1Q6IE81 842 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms