RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 WNT8BQ93098 351 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 PCDHB18PQ96TA0 734 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 SENP6Q9GZR1 1112 aaPredicted RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 HMX1Q9NP08 348 aaPredicted RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 TAS2R14Q9NYV8 317 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 CDC23Q9UJX2 597 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 ITGA11Q9UKX5 1188 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 NOC2LQ9Y3T9 749 aaKnown RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 PCDHB4Q9Y5E5 795 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 PCDHGC5Q9Y5F6 944 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 ANKRD62A6NC57 917 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 MOXD2PA6NHM9 499 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 ENC1O14682 589 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 RTN2O75298 545 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 ATP1A1P05023 1023 aaKnown RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 KRT19P08727 400 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 ATICP31939 592 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 PTPN11Q06124 597 aaPredicted RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 ITGA7Q13683 1181 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 IFI16Q16666 785 aaKnown RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 LHX8Q68G74 356 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 TMEM270Q6UE05 265 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 FAM228AQ86W67 206 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 DNAAF5Q86Y56 855 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 CTNNBL1Q8WYA6 563 aaPredicted RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 SNX27Q96L92 541 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
USP39-207ENST00000450066 VRTNQ9H8Y1 702 aa15.28■□□□□ 0.04
USP39-207ENST00000450066 CHRNA1P02708 482 aa15.27■□□□□ 0.03
USP39-207ENST00000450066 ITGB3P05106 788 aa15.27■□□□□ 0.03
USP39-207ENST00000450066 ASPAP45381 313 aa15.27■□□□□ 0.03
USP39-207ENST00000450066 UBXN11Q5T124 520 aa15.27■□□□□ 0.03
USP39-207ENST00000450066 ALKAL1Q6UXT8 129 aa15.27■□□□□ 0.03
USP39-207ENST00000450066 RBBP8NLQ8NC74 664 aaPredicted RBP15.27■□□□□ 0.03
USP39-207ENST00000450066 KIF12Q96FN5 646 aa15.27■□□□□ 0.03
USP39-207ENST00000450066 NXF3Q9H4D5 531 aaKnown RBP15.27■□□□□ 0.03
USP39-207ENST00000450066 FTLP02792 175 aaPredicted RBP15.26■□□□□ 0.03
USP39-207ENST00000450066 ZNF132P52740 706 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 MGAT3Q09327 533 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 ZNF667Q5HYK9 610 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 CISHQ9NSE2 258 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 DPP3Q9NY33 737 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 CNTN3Q9P232 1028 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 HES2Q9Y543 173 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 SAR1BQ9Y6B6 198 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 CITO14578 2027 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 NCANO14594 1321 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 RPS6KA5O75582 802 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 PALMO75781 387 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 STAU1O95793 577 aaKnown RBP15.26■□□□□ 0.03
USP39-207ENST00000450066 YWHAEP62258 255 aaKnown RBP15.26■□□□□ 0.03
USP39-207ENST00000450066 RBP5P82980 135 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 PTK7Q13308 1070 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 WDR72Q3MJ13 1102 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 RFFLQ8WZ73 363 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 GLT1D1Q96MS3 346 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 TSPAN18Q96SJ8 248 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 BCO2Q9BYV7 579 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 PTCH2Q9Y6C5 1203 aa15.26■□□□□ 0.03
USP39-207ENST00000450066 RECQL4O94761 1208 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 ABCB4P21439 1286 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 GNA15P30679 374 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 POLR2BP30876 1174 aaKnown RBP15.25■□□□□ 0.03
USP39-207ENST00000450066 THPOP40225 353 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 NOP2P46087 812 aaKnown RBP15.25■□□□□ 0.03
USP39-207ENST00000450066 ZBTB6Q15916 424 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 WHAMMP3Q1A5X7 153 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 RALGAPA2Q2PPJ7 1873 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 ZMAT2Q96NC0 199 aaKnown RBP15.25■□□□□ 0.03
USP39-207ENST00000450066 CARD6Q9BX69 1037 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 THAP2Q9H0W7 228 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 CHST12Q9NRB3 414 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 NXF1Q9UBU9 619 aaKnown RBP15.25■□□□□ 0.03
USP39-207ENST00000450066 ST3GAL5Q9UNP4 418 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 TRIM17Q9Y577 477 aa15.25■□□□□ 0.03
USP39-207ENST00000450066 GRID2IPA4D2P6 1211 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 DYNC1I1O14576 645 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 CTSHP09668 335 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 P4HA1P13674 534 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 PRLRP16471 622 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 TCEAL1Q15170 157 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 CLEC16AQ2KHT3 1053 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 XKR4Q5GH76 650 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 TWF2Q6IBS0 349 aaKnown RBP15.24■□□□□ 0.03
USP39-207ENST00000450066 MNS1Q8NEH6 495 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 SLC35G2Q8TBE7 412 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 HPDLQ96IR7 371 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 CALR3Q96L12 384 aaKnown RBP15.24■□□□□ 0.03
USP39-207ENST00000450066 CXCL16Q9H2A7 254 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 TSKSQ9UJT2 592 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 AGAP1Q9UPQ3 857 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 NOD1Q9Y239 953 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 IPPQ9Y573 584 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 CEP350Q5VT06 3117 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 GPR182O15218 404 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 CALCAP01258 141 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 WEE2P0C1S8 567 aa15.24■□□□□ 0.03
USP39-207ENST00000450066 CD58P19256 250 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms