RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 VTA1Q9NP79 307 aa8.65□□□□□ -1.02
LINC00954-202ENST00000449086 COL20A1Q9P218 1284 aa8.65□□□□□ -1.02
LINC00954-202ENST00000449086 GABRQQ9UN88 632 aa8.65□□□□□ -1.02
LINC00954-202ENST00000449086 BZW2Q9Y6E2 419 aaKnown RBP8.65□□□□□ -1.02
LINC00954-202ENST00000449086 DDX3XO00571 662 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 KIAA0391O15091 583 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CLIC2O15247 247 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 RIPK2O43353 540 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 AHCYL1O43865 530 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ENTPD5O75356 428 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 GNA14O95837 355 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 HMGCRP04035 888 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 FESP07332 822 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CCND2P30279 289 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ERFP50548 548 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CAP1Q01518 475 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 KLC1Q07866 573 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CALCOCO2Q13137 446 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ARHGAP44Q17R89 818 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 TSNAXIP1Q2TAA8 658 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 DCAF12L1Q5VU92 463 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ARHGEF16Q5VV41 709 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CCDC137Q6PK04 289 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 USP17L6PQ6QN14 398 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 GPBP1Q86WP2 473 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CCDC65Q8IXS2 484 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 HES6Q96HZ4 224 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PDCD2LQ9BRP1 358 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 TINF2Q9BSI4 451 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 A0A1B0GVG6 124 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 A6NHS1 94 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 LRRN2O75325 713 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 AFPP02771 609 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PGK2P07205 417 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PON1P27169 355 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 STAT1P42224 750 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CNTN2Q02246 1040 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PGM5Q15124 567 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 TRIP13Q15645 432 aaPredicted RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PPP1R15BQ5SWA1 713 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ZDHHC24Q6UX98 284 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 VSIG10LQ86VR7 867 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 RASGEF1CQ8N431 466 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PIGOQ8TEQ8 1089 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 TAAR1Q96RJ0 339 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 NKIRAS1Q9NYS0 192 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 AJAP1Q9UKB5 411 aaPredicted RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 MAFGO15525 162 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ADCY3O60266 1144 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 PYGLP06737 847 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CYP2B6P20813 491 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 HOXA13P31271 388 aaPredicted RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CIITAP33076 1130 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 MARCKSL1P49006 195 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 STXBP2Q15833 593 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ZCWPW2Q504Y3 356 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 TTC8Q8TAM2 541 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 SCFD1Q8WVM8 642 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ALG3Q92685 438 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CEP63Q96MT8 703 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 POP1Q99575 1024 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ABHD16BQ9H3Z7 469 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 RNPEPL1Q9HAU8 725 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 METTL5Q9NRN9 209 aaKnown RBP8.64□□□□□ -1.03
LINC00954-202ENST00000449086 CTTNBP2NLQ9P2B4 639 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 IGSF9BQ9UPX0 1349 aa8.64□□□□□ -1.03
LINC00954-202ENST00000449086 ASTN1O14525 1302 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 GSTTP1A0A1W2PQM5 241 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 UNC5CO95185 931 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 NR3C2P08235 984 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 CALB2P22676 271 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 EPHB2P29323 1055 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 PTDSS1P48651 473 aaKnown RBP8.63□□□□□ -1.03
LINC00954-202ENST00000449086 MRPS35P82673 323 aaKnown RBP8.63□□□□□ -1.03
LINC00954-202ENST00000449086 POU5F1Q01860 360 aaKnown RBP8.63□□□□□ -1.03
LINC00954-202ENST00000449086 DNAJC3Q13217 504 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 GALNTL6Q49A17 601 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 COBLL1Q53SF7 1204 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 MAP3K21Q5TCX8 1036 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
LINC00954-202ENST00000449086 ARMCX2Q7L311 632 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 RPUSD2Q8IZ73 545 aaKnown RBP8.63□□□□□ -1.03
LINC00954-202ENST00000449086 DNAJC9Q8WXX5 260 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 SEC14L1Q92503 715 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 CDHR1Q96JP9 859 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 MTMR9Q96QG7 549 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 TXLNGYQ9BZA5 131 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 THAP2Q9H0W7 228 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 ASIC3Q9UHC3 531 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 CYP3A7-CYP3A51PA0A087WV96 503 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 POTEB3A0JP26 581 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 ANKRD63C9JTQ0 380 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 CBX6O95503 412 aa8.63□□□□□ -1.03
LINC00954-202ENST00000449086 CYP3A7P24462 503 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms