RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 CCL23P55773 120 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 CUL2Q13617 745 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 ZBTB6Q15916 424 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 ZNF699Q32M78 642 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 AGMOQ6ZNB7 445 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 AKR1B10O60218 316 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 ATF7P17544 494 aaPredicted RBP26.73■■□□□ 1.87
RFFL-206ENST00000447669 CLCN1P35523 988 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 GCNT1Q02742 428 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 SOX4Q06945 474 aaPredicted RBP26.73■■□□□ 1.87
RFFL-206ENST00000447669 SGSM1Q2NKQ1 1148 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 SLC47A2Q86VL8 602 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 CD302Q8IX05 232 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 SLC20A1Q8WUM9 679 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 GAD1Q99259 594 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 IMPG2Q9BZV3 1241 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 MIOSQ9NXC5 875 aa26.73■■□□□ 1.87
RFFL-206ENST00000447669 A0A087X0T9 212 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 PTGESO14684 152 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 FAM228BP0C875 321 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 ITGA4P13612 1032 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 KRT5P13647 590 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 MAPK8IP2Q13387 824 aaPredicted RBP26.72■■□□□ 1.87
RFFL-206ENST00000447669 ANKRD33Q7Z3H0 272 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 FAM71AQ8IYT1 594 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 GSTCDQ8NEC7 633 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 LINC01599Q8WXQ3 324 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 WEE2P0C1S8 567 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 FERP16591 822 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 IGFBP6P24592 240 aaPredicted RBP26.72■■□□□ 1.87
RFFL-206ENST00000447669 CYLC1P35663 651 aaPredicted RBP26.72■■□□□ 1.87
RFFL-206ENST00000447669 RAP1GAPP47736 663 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 BFSP2Q13515 415 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 TCTN1Q2MV58 587 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 WDR72Q3MJ13 1102 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 CCDC170Q8IYT3 715 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 USP38Q8NB14 1042 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 OLIG1Q8TAK6 271 aa26.72■■□□□ 1.87
RFFL-206ENST00000447669 C16orf45Q96MC5 204 aaPredicted RBP26.72■■□□□ 1.87
RFFL-206ENST00000447669 RCCD1A6NED2 376 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 CCDC175P0C221 793 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 CD58P19256 250 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 CYP2C18P33260 490 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 PRKCIP41743 596 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 XKR4Q5GH76 650 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 HIPK3Q9H422 1215 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 LZTFL1Q9NQ48 299 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 TRIM10Q9UDY6 481 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 SQORQ9Y6N5 450 aa26.71■■□□□ 1.87
RFFL-206ENST00000447669 ACO1P21399 889 aaKnown RBP26.7■■□□□ 1.87
RFFL-206ENST00000447669 CDH8P55286 799 aa26.7■■□□□ 1.87
RFFL-206ENST00000447669 LRRC26Q2I0M4 334 aa26.7■■□□□ 1.87
RFFL-206ENST00000447669 SEZ6LQ9BYH1 1024 aa26.7■■□□□ 1.87
RFFL-206ENST00000447669 A0A0U1RQF3 1178 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 SSU72P8A0A1W2PR75 194 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 DCDC2CA8MYV0 355 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 TLR3O15455 904 aaKnown RBP26.7■■□□□ 1.86
RFFL-206ENST00000447669 ASPAP45381 313 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 DBF4BQ8NFT6 615 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 HPDLQ96IR7 371 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 WNT8AQ9H1J5 351 aa26.7■■□□□ 1.86
RFFL-206ENST00000447669 EIF3CLB5ME19 914 aaKnown RBP26.69■■□□□ 1.86
RFFL-206ENST00000447669 TAF3Q5VWG9 929 aa26.69■■□□□ 1.86
RFFL-206ENST00000447669 RABGGTAQ92696 567 aa26.69■■□□□ 1.86
RFFL-206ENST00000447669 EIF3CQ99613 913 aaKnown RBP26.69■■□□□ 1.86
RFFL-206ENST00000447669 ITGA11Q9UKX5 1188 aa26.69■■□□□ 1.86
RFFL-206ENST00000447669 ARL5CA6NH57 179 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 KCNE1P15382 129 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 ZNF394Q53GI3 561 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 TMEM270Q6UE05 265 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 NOP9Q86U38 636 aaKnown RBP26.68■■□□□ 1.86
RFFL-206ENST00000447669 PALB2Q86YC2 1186 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 GLYCTKQ8IVS8 523 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 LNX1Q8TBB1 728 aaPredicted RBP26.68■■□□□ 1.86
RFFL-206ENST00000447669 IRX2Q9BZI1 471 aaPredicted RBP26.68■■□□□ 1.86
RFFL-206ENST00000447669 NIF3L1Q9GZT8 377 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 MCOLN1Q9GZU1 580 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 SDCBP2Q9H190 292 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 C11orf49Q9H6J7 331 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 KCND1Q9NSA2 647 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 DERAQ9Y315 318 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 DAAM1Q9Y4D1 1078 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 PCDHB4Q9Y5E5 795 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 DDX3XO00571 662 aaKnown RBP eCLIP26.68■■□□□ 1.863e-14■■■□□ 16.2
RFFL-206ENST00000447669 OFD1O75665 1012 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 SSTR3P32745 418 aaPredicted RBP26.68■■□□□ 1.86
RFFL-206ENST00000447669 SCNN1GP51170 649 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 RBP5P82980 135 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 MRPL10Q7Z7H8 261 aaKnown RBP26.68■■□□□ 1.86
RFFL-206ENST00000447669 NT5DC4Q86YG4 428 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 BEST2Q8NFU1 509 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 SMYD3Q9H7B4 428 aa26.68■■□□□ 1.86
RFFL-206ENST00000447669 PITPNM1O00562 1244 aa26.67■■□□□ 1.86
RFFL-206ENST00000447669 ZNF667Q5HYK9 610 aa26.67■■□□□ 1.86
RFFL-206ENST00000447669 ECHDC2Q86YB7 292 aa26.67■■□□□ 1.86
RFFL-206ENST00000447669 SYT11Q9BT88 431 aa26.67■■□□□ 1.86
RFFL-206ENST00000447669 LACRTQ9GZZ8 138 aa26.67■■□□□ 1.86
RFFL-206ENST00000447669 RGS18Q9NS28 235 aa26.67■■□□□ 1.86
RFFL-206ENST00000447669 UBQLN1Q9UMX0 589 aaKnown RBP26.67■■□□□ 1.86
RFFL-206ENST00000447669 DUSP10Q9Y6W6 482 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms