RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 RRP36Q96EU6 259 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 AP5M1Q9H0R1 490 aa8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 TMPRSS5Q9H3S3 457 aa8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 RBM28Q9NW13 759 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 PCDHA1Q9Y5I3 950 aa8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 SLC12A7Q9Y666 1083 aa8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 ALPK3Q96L96 1907 aa8.92□□□□□ -0.98
SMARCE1-206ENST00000447024 ASTN1O14525 1302 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 CCDC196A0A1B0GTZ2 297 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 FGF10O15520 208 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 KPNA6O60684 536 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 STAM2O75886 525 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 PGK1P00558 417 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 C6orf222P0C671 652 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 ACRP10323 421 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 CALML3P27482 149 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 ADCYAP1R1P41586 468 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 ACLYP53396 1101 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 STXBP2Q15833 593 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 LRRC26Q2I0M4 334 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 BICRALQ6AI39 1079 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 TAPT1Q6NXT6 567 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 XRRA1Q6P2D8 792 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 SLC30A10Q6XR72 485 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 SLITRK4Q8IW52 837 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 FANCBQ8NB91 859 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 DHRS1Q96LJ7 313 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 GLT1D1Q96MS3 346 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 GDF15Q99988 308 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 SPATA25Q9BR10 227 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 SRRTQ9BXP5 876 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 PRO3102Q9H379 93 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 VAT1LQ9HCJ6 419 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 SEC63Q9UGP8 760 aaKnown RBP8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 PMF1-BGLAPU3KQ54 211 aa8.91□□□□□ -0.98
SMARCE1-206ENST00000447024 LCTP09848 1927 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 A0A1W2PQJ5 194 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 GCOM1H8Y6P7 765 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 hCG_1984214I3L0E3 225 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 CYTH3O43739 400 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 EIF3JO75822 258 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 POLR2MP0CAP2 368 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 TGFB3P10600 412 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 CPT1AP50416 773 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 HABP4Q5JVS0 413 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 NT5DC1Q5TFE4 455 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 TDRD10Q5VZ19 366 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 ANO1Q5XXA6 986 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 APOA5Q6Q788 366 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 NOL8Q76FK4 1167 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 CHST3Q7LGC8 479 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 ANKRD33Q7Z3H0 272 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 TLK2Q86UE8 772 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 ZNF713Q8N859 430 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 RMDN3Q96TC7 470 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 NT5C1AQ9BXI3 368 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 WDR11Q9BZH6 1224 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 TM6SF1Q9BZW5 370 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 GLT8D2Q9H1C3 349 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 CPVLQ9H3G5 476 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 STARD7Q9NQZ5 370 aa8.9□□□□□ -0.98
SMARCE1-206ENST00000447024 DNAH12Q6ZR08 3092 aa8.9□□□□□ -0.99
SMARCE1-206ENST00000447024 RANBP2P49792 3224 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 A0A0U1RQG5 324 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 ZBTB43O43298 467 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 CFBP00751 764 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 ASGR1P07306 291 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 INSRRP14616 1297 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 FSCN1Q16658 493 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 UBXN11Q5T124 520 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 ARHGEF16Q5VV41 709 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 BLOC1S2Q6QNY1 142 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 PPFIBP1Q86W92 1011 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 SKAP1Q86WV1 359 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 FBXO16Q8IX29 292 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 CUL5Q93034 780 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 PIGSQ96S52 555 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 LBHD1Q9BQE6 289 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 AGXT2Q9BYV1 514 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 RNF38Q9H0F5 515 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 PXMP2Q9NR77 195 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 FAN1Q9Y2M0 1017 aa8.89□□□□□ -0.99
SMARCE1-206ENST00000447024 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 FRMPD4Q14CM0 1322 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 K7ESM1 405 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 ARVCFO00192 962 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 CTAGE5O15320 804 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 PPP1R11O60927 126 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 TACR1P25103 407 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 MC3RP41968 323 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 CDK7P50613 346 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 PMS1P54277 932 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 EVCP57679 992 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 PRR5P85299 388 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 SLC35G1Q2M3R5 365 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 MCTP2Q6DN12 878 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 CCDC62Q6P9F0 684 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 TMTC3Q6ZXV5 915 aa8.88□□□□□ -0.99
SMARCE1-206ENST00000447024 FERMT3Q86UX7 667 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms