RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 RPGRIP1Q96KN7 1286 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 POMKQ9H5K3 350 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 C2CD2Q9Y426 696 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 NR2E1Q9Y466 385 aa20.22■□□□□ 0.83
CCDC188-202ENST00000444532 CCDC195A0A1B0GUA6 201 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 PAPLNO95428 1278 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 MYL1P05976 194 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 SPATA31D3P0C874 917 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 ALADP13716 330 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 PAX3P23760 479 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 CASP1P29466 404 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 OR1D2P34982 312 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 SYKP43405 635 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 RAB33AQ14088 237 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 SPATA31D4Q6ZUB0 917 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 GLIS3Q8NEA6 775 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 ZDHHC7Q9NXF8 308 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
CCDC188-202ENST00000444532 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.2■□□□□ 0.82
CCDC188-202ENST00000444532 H7C4K7 107 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 NFICP08651 508 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 WEE2P0C1S8 567 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 HOXD13P35453 343 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 MRPL58Q14197 206 aaKnown RBP20.2■□□□□ 0.82
CCDC188-202ENST00000444532 VARS2Q5ST30 1063 aaKnown RBP20.2■□□□□ 0.82
CCDC188-202ENST00000444532 ARMCX5Q6P1M9 558 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 RNF135Q8IUD6 432 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 GRAMD1CQ8IYS0 662 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 APPL2Q8NEU8 664 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 CBWD1Q9BRT8 395 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 C1QTNF1Q9BXJ1 281 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 FBXW11Q9UKB1 542 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 PCDHB8Q9UN66 801 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 UBE4BO95155 1302 aa20.2■□□□□ 0.82
CCDC188-202ENST00000444532 C2orf16Q68DN1 1984 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 M0QZQ0 153 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 ADAM12O43184 909 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 EXTL3O43909 919 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 AARSP49588 968 aaKnown RBP eCLIP20.19■□□□□ 0.82
CCDC188-202ENST00000444532 NDUFA8P51970 172 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 SNRPFP62306 86 aaKnown RBP20.19■□□□□ 0.82
CCDC188-202ENST00000444532 PSMD2Q13200 908 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 RTL10Q7L3V2 364 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 SAAL1Q96ER3 474 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 EPHX3Q9H6B9 360 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 CDY1Q9Y6F8 540 aa20.19■□□□□ 0.82
CCDC188-202ENST00000444532 ANO9A1A5B4 782 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 PIRO00625 290 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 DCXO43602 365 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 TBC1D4O60343 1298 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 RFPL2O75678 378 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 ZMYND10O75800 440 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 GUCY2FP51841 1108 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 UVSSAQ2YD98 709 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 C9orf57Q5W0N0 161 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 SLC8B1Q6J4K2 584 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 RSPO2Q6UXX9 243 aaPredicted RBP20.18■□□□□ 0.82
CCDC188-202ENST00000444532 BRSK2Q8IWQ3 736 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 GPD1LQ8N335 351 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 TMEM130Q8N3G9 435 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 FSIP1Q8NA03 581 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 ZSWIM2Q8NEG5 633 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 SCFD1Q8WVM8 642 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 PRKD2Q9BZL6 878 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 PCIF1Q9H4Z3 704 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 GDPD2Q9HCC8 539 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 KIAA1586Q9HCI6 787 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 SLC39A2Q9NP94 309 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 DPP3Q9NY33 737 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 RBAKQ9NYW8 714 aaPredicted RBP20.18■□□□□ 0.82
CCDC188-202ENST00000444532 USTQ9Y2C2 406 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 DENND4AQ7Z401 1863 aa20.18■□□□□ 0.82
CCDC188-202ENST00000444532 KLRC4O43908 158 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 HNRNPA1P09651 372 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC188-202ENST00000444532 LILRA4P59901 499 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 BMT2Q1RMZ1 405 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 LIN9Q5TKA1 542 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 ZNF461Q8TAF7 563 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 CACTINQ8WUQ7 758 aaKnown RBP20.17■□□□□ 0.82
CCDC188-202ENST00000444532 SMG7Q92540 1137 aaKnown RBP20.17■□□□□ 0.82
CCDC188-202ENST00000444532 OXCT2Q9BYC2 517 aaPredicted RBP20.17■□□□□ 0.82
CCDC188-202ENST00000444532 TSHZ2Q9NRE2 1034 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 EXOC1Q9NV70 894 aa20.17■□□□□ 0.82
CCDC188-202ENST00000444532 CGNQ9P2M7 1197 aaKnown RBP20.17■□□□□ 0.82
CCDC188-202ENST00000444532 GOLGA8IPA6NC78 632 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 GOLGA8JA6NMD2 632 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 TGFB1I1O43294 461 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 HOXA9P31269 272 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 CTXN3Q4LDR2 81 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 ZNF280DQ6N043 979 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 DSTYKQ6XUX3 929 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 CCDC149Q6ZUS6 474 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 EFCAB13Q8IY85 973 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 PLCD3Q8N3E9 789 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 FEZF2Q8TBJ5 459 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 ZNF707Q96C28 371 aaPredicted RBP20.16■□□□□ 0.82
CCDC188-202ENST00000444532 PIDD1Q9HB75 910 aa20.16■□□□□ 0.82
CCDC188-202ENST00000444532 WDR6Q9NNW5 1121 aaKnown RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms